RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 YTHDF2Q9Y5A9 579 aaKnown RBP13.22□□□□□ -0.29
LTBR-211ENST00000543190 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 PMS2P5A8MQ11 134 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 LYRM9A8MSI8 78 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 H3BRN7 92 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 WRBO00258 174 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 CRXO43186 299 aaPredicted RBP13.21□□□□□ -0.29
LTBR-211ENST00000543190 FXYD7P58549 80 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 TMEM182Q6ZP80 229 aaPredicted RBP13.21□□□□□ -0.29
LTBR-211ENST00000543190 ACOT7LQ6ZUV0 252 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 C15orf53Q8NAA6 179 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 SHANK2-AS3Q9BTD1 123 aa13.21□□□□□ -0.29
LTBR-211ENST00000543190 PCLOQ9Y6V0 5065 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 A0A087X0K7 114 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 TRAV8-2A0A0B4J237 113 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 PRSS29PA6NIE9 313 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 RPL7P18124 248 aaKnown RBP13.2□□□□□ -0.3
LTBR-211ENST00000543190 S100A5P33763 92 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 EMP1P54849 157 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 OR11H7Q8NGC8 314 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 TMEM147Q9BVK8 224 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 SLC25A39Q9BZJ4 359 aaPredicted RBP13.2□□□□□ -0.3
LTBR-211ENST00000543190 MAGT1Q9H0U3 335 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 RNF24Q9Y225 148 aa13.2□□□□□ -0.3
LTBR-211ENST00000543190 C9orf170A2RU37 121 aa13.19□□□□□ -0.3
LTBR-211ENST00000543190 NAP1L6A6NFF2 107 aa13.19□□□□□ -0.3
LTBR-211ENST00000543190 ZNF701M0R085 212 aaPredicted RBP13.19□□□□□ -0.3
LTBR-211ENST00000543190 HOXB5P09067 269 aa13.19□□□□□ -0.3
LTBR-211ENST00000543190 CNN1P51911 297 aaKnown RBP13.19□□□□□ -0.3
LTBR-211ENST00000543190 AKR1C1Q04828 323 aa13.19□□□□□ -0.3
LTBR-211ENST00000543190 S100A7AQ86SG5 101 aa13.19□□□□□ -0.3
LTBR-211ENST00000543190 SMIM8Q96KF7 97 aa13.19□□□□□ -0.3
LTBR-211ENST00000543190 C7orf50Q9BRJ6 194 aaKnown RBP13.19□□□□□ -0.3
LTBR-211ENST00000543190 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
LTBR-211ENST00000543190 NDUFB6O95139 128 aa13.18□□□□□ -0.3
LTBR-211ENST00000543190 ORM2P19652 201 aa13.18□□□□□ -0.3
LTBR-211ENST00000543190 GATA2P23769 480 aaPredicted RBP13.18□□□□□ -0.3
LTBR-211ENST00000543190 DLK1P80370 383 aa13.18□□□□□ -0.3
LTBR-211ENST00000543190 CYP2G1PQ6ZSU1 146 aa13.18□□□□□ -0.3
LTBR-211ENST00000543190 TMEM256Q8N2U0 113 aa13.18□□□□□ -0.3
LTBR-211ENST00000543190 INSP01308 110 aa13.17□□□□□ -0.3
LTBR-211ENST00000543190 TAS2R30P59541 319 aa13.17□□□□□ -0.3
LTBR-211ENST00000543190 DAD1P61803 113 aa13.17□□□□□ -0.3
LTBR-211ENST00000543190 PXDC1Q5TGL8 231 aa13.17□□□□□ -0.3
LTBR-211ENST00000543190 TMEM14EPQ6UXP3 125 aa13.17□□□□□ -0.3
LTBR-211ENST00000543190 SRRQ9GZT4 340 aa13.17□□□□□ -0.3
LTBR-211ENST00000543190 RBM38Q9H0Z9 239 aaKnown RBP13.17□□□□□ -0.3
LTBR-211ENST00000543190 PAIP2BQ9ULR5 123 aaKnown RBP13.17□□□□□ -0.3
LTBR-211ENST00000543190 HIGD1AQ9Y241 93 aa13.17□□□□□ -0.3
LTBR-211ENST00000543190 DNAH11Q96DT5 4516 aa13.16□□□□□ -0.3
LTBR-211ENST00000543190 PLAC8L1A1L4L8 177 aa13.16□□□□□ -0.3
LTBR-211ENST00000543190 CXCL3P19876 107 aa13.16□□□□□ -0.3
LTBR-211ENST00000543190 RAP2BP61225 183 aa13.16□□□□□ -0.3
LTBR-211ENST00000543190 NPVFQ9HCQ7 196 aa13.16□□□□□ -0.3
LTBR-211ENST00000543190 BOLA2-SMG1P6H3BVE0 249 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 MRPS12O15235 138 aaKnown RBP13.15□□□□□ -0.3
LTBR-211ENST00000543190 HYPMO75409 117 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 ADAP1O75689 374 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 IL5P05113 134 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 CXCL2P19875 107 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.3
LTBR-211ENST00000543190 SOHLH1Q5JUK2 328 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 SPANXN2Q5MJ10 180 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 TMEM88Q6PEY1 159 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 GGACTQ9BVM4 153 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
LTBR-211ENST00000543190 H3BP45 60 aa13.14□□□□□ -0.31
LTBR-211ENST00000543190 TSC22D2O75157 780 aa13.14□□□□□ -0.31
LTBR-211ENST00000543190 LINC00869P0C866 280 aa13.14□□□□□ -0.31
LTBR-211ENST00000543190 SPINK13Q1W4C9 94 aa13.14□□□□□ -0.31
LTBR-211ENST00000543190 CNPY1Q3B7I2 92 aa13.14□□□□□ -0.31
LTBR-211ENST00000543190 UBE2DNLQ8IWF7 75 aa13.14□□□□□ -0.31
LTBR-211ENST00000543190 OR8A1Q8NGG7 326 aa13.14□□□□□ -0.31
LTBR-211ENST00000543190 PSENENQ9NZ42 101 aa13.14□□□□□ -0.31
LTBR-211ENST00000543190 M0R2N4 97 aa13.13□□□□□ -0.31
LTBR-211ENST00000543190 M0R2Z0 102 aa13.13□□□□□ -0.31
LTBR-211ENST00000543190 OR4E1P0C645 316 aa13.13□□□□□ -0.31
LTBR-211ENST00000543190 PSG3Q16557 428 aa13.13□□□□□ -0.31
LTBR-211ENST00000543190 TEPPQ6URK8 271 aa13.13□□□□□ -0.31
LTBR-211ENST00000543190 GSG1LQ6UXU4 331 aa13.13□□□□□ -0.31
LTBR-211ENST00000543190 RNF182Q8N6D2 247 aa13.13□□□□□ -0.31
LTBR-211ENST00000543190 C20orf144Q9BQM9 153 aa13.13□□□□□ -0.31
LTBR-211ENST00000543190 TAS2R60P59551 318 aa13.12□□□□□ -0.31
LTBR-211ENST00000543190 PATE2Q6UY27 113 aa13.12□□□□□ -0.31
LTBR-211ENST00000543190 ZNF493Q6ZR52 646 aa13.12□□□□□ -0.31
LTBR-211ENST00000543190 DYNC1H1Q14204 4646 aaKnown RBP13.12□□□□□ -0.31
LTBR-211ENST00000543190 CBY3A6NI87 242 aa13.11□□□□□ -0.31
LTBR-211ENST00000543190 C1orf134Q5TEV5 83 aa13.11□□□□□ -0.31
LTBR-211ENST00000543190 LCN15Q6UWW0 184 aa13.11□□□□□ -0.31
LTBR-211ENST00000543190 ZNF738Q8NE65 137 aa13.11□□□□□ -0.31
LTBR-211ENST00000543190 OR10P1Q8NGE3 313 aa13.11□□□□□ -0.31
LTBR-211ENST00000543190 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
LTBR-211ENST00000543190 SSSCA1O60232 199 aa13.1□□□□□ -0.31
LTBR-211ENST00000543190 BTCP35070 178 aa13.1□□□□□ -0.31
LTBR-211ENST00000543190 BAK1Q16611 211 aa13.1□□□□□ -0.31
LTBR-211ENST00000543190 IGFL4Q6B9Z1 124 aa13.1□□□□□ -0.31
LTBR-211ENST00000543190 ZNF546Q86UE3 836 aa13.1□□□□□ -0.31
LTBR-211ENST00000543190 BAP18Q8IXM2 172 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms