RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SRSF8Q9BRL6 282 aaKnown RBP10.69□□□□□ -0.7
TNC-212ENST00000542877 MPDZO75970 2070 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 TDGF1P3P51864 188 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 C20orf204Q6ZNR8 217 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 CHCHD5Q9BSY4 110 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 CRPP02741 224 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 Q86TA4 180 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 LINC00527Q9UJ94 153 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 SRD5A1P18405 259 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 TMEM158Q8WZ71 300 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 ANAPC10Q9UM13 185 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 CACNA1EQ15878 2313 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 WDR90Q96KV7 1748 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 C9JQL5 133 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 EFNA4P52798 201 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 LINC00158P58513 81 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 KIR3DS1Q14943 382 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 TEX43Q6ZNM6 134 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 A0A0U1RRA0 63 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 PRB4P10163 310 aaPredicted RBP10.68□□□□□ -0.7
TNC-212ENST00000542877 PRR31Q5SQ13 230 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 RCHY1Q96PM5 261 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 TRAV8-1A0A0A6YYK1 113 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 SRRM4A7MD48 611 aaKnown RBP10.68□□□□□ -0.7
TNC-212ENST00000542877 PFN1P07737 140 aaKnown RBP10.68□□□□□ -0.7
TNC-212ENST00000542877 PDE6HQ13956 83 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 Q8TAT8 98 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 WFDC12Q8WWY7 111 aa10.68□□□□□ -0.7
TNC-212ENST00000542877 CEP250Q9BV73 2442 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 A8MWP6 167 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 FXYD7P58549 80 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 NDUFS8O00217 210 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 ESDP10768 282 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 ANK1P16157 1881 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 DTX2Q86UW9 622 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 MBD3L4A6NDZ8 208 aaPredicted RBP10.67□□□□□ -0.7
TNC-212ENST00000542877 MBD3L3A6NE82 208 aaPredicted RBP10.67□□□□□ -0.7
TNC-212ENST00000542877 MBD3L5A6NJ08 208 aaPredicted RBP10.67□□□□□ -0.7
TNC-212ENST00000542877 NDUFS6O75380 124 aaKnown RBP10.67□□□□□ -0.7
TNC-212ENST00000542877 DSCR9P59020 149 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 MBD3L2Q8NHZ7 208 aaPredicted RBP10.67□□□□□ -0.7
TNC-212ENST00000542877 ZNF492Q9P255 531 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 FAM231BA6NCW3 169 aa10.67□□□□□ -0.7
TNC-212ENST00000542877 KLRD1Q13241 179 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 RASL10AQ92737 203 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 AKAP6Q13023 2319 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 LINC00205P59089 165 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 LURAP1LQ8IV03 231 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 AMN1Q8IY45 258 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 SHANK2-AS3Q9BTD1 123 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 RPL36AP83881 106 aaKnown RBP10.66□□□□□ -0.7
TNC-212ENST00000542877 RPL36ALQ969Q0 106 aaKnown RBP10.66□□□□□ -0.7
TNC-212ENST00000542877 USMG5Q96IX5 58 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 PRADC1Q9BSG0 188 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 TRIOBPQ9H2D6 2365 aa10.66□□□□□ -0.7
TNC-212ENST00000542877 IGKV1-6A0A0C4DH72 117 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 PRTN3P24158 256 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 PHLDA1Q8WV24 401 aaPredicted RBP10.65□□□□□ -0.7
TNC-212ENST00000542877 POLR3KQ9Y2Y1 108 aaPredicted RBP10.65□□□□□ -0.7
TNC-212ENST00000542877 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
TNC-212ENST00000542877 LRRK1Q38SD2 2015 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 IGHG3P01860 377 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 SPACA3Q8IXA5 215 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 CT83Q5H943 113 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 S100A7L2Q5SY68 101 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 CHAC1Q9BUX1 264 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 COX11Q9Y6N1 276 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 TMEM155Q4W5P6 130 aa10.65□□□□□ -0.7
TNC-212ENST00000542877 ZNF474Q6S9Z5 364 aaPredicted RBP10.65□□□□□ -0.7
TNC-212ENST00000542877 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.7
TNC-212ENST00000542877 FAM223BA6NKX1 122 aa10.65□□□□□ -0.71
TNC-212ENST00000542877 LGALS1P09382 135 aaKnown RBP10.65□□□□□ -0.71
TNC-212ENST00000542877 TMEM219Q86XT9 240 aa10.65□□□□□ -0.71
TNC-212ENST00000542877 FAM223AQ8IWN6 122 aa10.65□□□□□ -0.71
TNC-212ENST00000542877 SPAG8Q99932 426 aaPredicted RBP10.65□□□□□ -0.71
TNC-212ENST00000542877 SIP14410 1827 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 GVINP1Q7Z2Y8 2422 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 EREGO14944 169 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 SSBP2P81877 361 aaPredicted RBP10.64□□□□□ -0.71
TNC-212ENST00000542877 MLANAQ16655 118 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 LIME1Q9H400 295 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 E9PQ18 207 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 ETV2O00321 342 aaPredicted RBP10.64□□□□□ -0.71
TNC-212ENST00000542877 TMEM249Q2WGJ8 235 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 IGKV1-16P04430 117 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 DTX1Q86Y01 620 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 TMEM75Q8N9X5 138 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 ZNF688P0C7X2 276 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 LMO1P25800 156 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 C18orf32Q8TCD1 76 aa10.64□□□□□ -0.71
TNC-212ENST00000542877 NDPQ00604 133 aa10.63□□□□□ -0.71
TNC-212ENST00000542877 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
TNC-212ENST00000542877 OVOL2Q9BRP0 275 aa10.63□□□□□ -0.71
TNC-212ENST00000542877 XIRP1Q702N8 1843 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms