RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 GPR183P32249 361 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 ZNF506Q5JVG8 444 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 C9orf66Q5T8R8 295 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 ZNF343Q6P1L6 599 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 PATE2Q6UY27 113 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 OR1B1Q8NGR6 318 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 SUN5Q8TC36 379 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 MYOZ3Q8TDC0 251 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 TMEM190Q8WZ59 177 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 RNF125Q96EQ8 232 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 DUX3Q96PT4 197 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 SEPSECSQ9HD40 501 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 MRPL27Q9P0M9 148 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 DNAH1Q9P2D7 4330 aa8.85□□□□□ -0.99
SRGAP1-205ENST00000542841 HUWE1Q7Z6Z7 4374 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 RBFOX3A6NFN3 312 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 OR2T8A6NH00 312 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 CCL24O00175 119 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 BMPR1BO00238 502 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 HSPB1P04792 205 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 IL4P05112 153 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 ARL14EPLP0DKL9 152 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 BCL2P10415 239 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 ORM2P19652 201 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 ADMP35318 185 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 FGF8P55075 233 aaPredicted RBP8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 LYZP61626 148 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 CLEC19AQ6UXS0 136 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 MIR17HGQ75NE6 70 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 RAX2Q96IS3 184 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 SCRT1Q9BWW7 348 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 EIF5A2Q9GZV4 153 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 SMAD5-AS1Q9Y6J3 95 aa8.84□□□□□ -0.99
SRGAP1-205ENST00000542841 LOC102723971A0A1B0GUV8 181 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 H3BRN7 92 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 I3L521 148 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 ZP3P21754 424 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 GCHFRP30047 84 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 CCL20P78556 96 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 TOR2AQ5JU69 321 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 UBE2E2Q96LR5 201 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 CHRDL1Q9BU40 450 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 TMEM14CQ9P0S9 112 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 VAX2Q9UIW0 290 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 ZNF256Q9Y2P7 627 aaPredicted RBP8.83□□□□□ -1
SRGAP1-205ENST00000542841 S4R3C0 116 aa8.83□□□□□ -1
SRGAP1-205ENST00000542841 CSMD3Q7Z407 3707 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 A0A1B0GV50 99 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 TMEM218A2RU14 115 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 NDUFA4O00483 81 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 IGHV3-23P01764 117 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 ARL3P36405 182 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 DEFA5Q01523 94 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 FAM167A-AS1Q96KT0 104 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 SHANK2-AS3Q9BTD1 123 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 SLC25A2Q9BXI2 301 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 SLC25A39Q9BZJ4 359 aaPredicted RBP8.82□□□□□ -1
SRGAP1-205ENST00000542841 NKX6-2Q9C056 277 aaPredicted RBP8.82□□□□□ -1
SRGAP1-205ENST00000542841 KLK15Q9H2R5 256 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 ZMAT4Q9H898 229 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 ZFAND3Q9H8U3 227 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 TREM1Q9NP99 234 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 DOK5Q9P104 306 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 GNG13Q9P2W3 67 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 RABAC1Q9UI14 185 aa8.82□□□□□ -1
SRGAP1-205ENST00000542841 PUS1Q9Y606 427 aaKnown RBP eCLIP8.82□□□□□ -1
SRGAP1-205ENST00000542841 HMGB3O15347 200 aaKnown RBP8.81□□□□□ -1
SRGAP1-205ENST00000542841 OR7C2O60412 319 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 GGCTO75223 188 aaKnown RBP8.81□□□□□ -1
SRGAP1-205ENST00000542841 MEF2BQ02080 365 aaPredicted RBP8.81□□□□□ -1
SRGAP1-205ENST00000542841 KIAA0141Q14154 515 aaPredicted RBP8.81□□□□□ -1
SRGAP1-205ENST00000542841 ICAM4Q14773 271 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 HAGHQ16775 308 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 ZFAND6Q6FIF0 208 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 TOMM20LQ6UXN7 152 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 GPR82Q96P67 336 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 PAXXQ9BUH6 204 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 SEC11CQ9BY50 192 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 KRTAP17-1Q9BYP8 105 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 SLC35B3Q9H1N7 401 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 OR51M1Q9H341 326 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 GNB4Q9HAV0 340 aa8.81□□□□□ -1
SRGAP1-205ENST00000542841 PEF1Q9UBV8 284 aaKnown RBP8.81□□□□□ -1
SRGAP1-205ENST00000542841 A0A1W2PRE2 83 aa8.8□□□□□ -1
SRGAP1-205ENST00000542841 TMEM250H0YL14 139 aa8.8□□□□□ -1
SRGAP1-205ENST00000542841 LGALS1P09382 135 aaKnown RBP8.8□□□□□ -1
SRGAP1-205ENST00000542841 UBE2L3P68036 154 aaKnown RBP8.8□□□□□ -1
SRGAP1-205ENST00000542841 USF2Q15853 346 aaPredicted RBP8.8□□□□□ -1
SRGAP1-205ENST00000542841 DEFB136Q30KP8 78 aa8.8□□□□□ -1
SRGAP1-205ENST00000542841 C1orf194Q5T5A4 169 aa8.8□□□□□ -1
SRGAP1-205ENST00000542841 LCNL1Q6ZST4 164 aa8.8□□□□□ -1
SRGAP1-205ENST00000542841 BPIFA4PQ86YQ2 179 aa8.8□□□□□ -1
SRGAP1-205ENST00000542841 IQCF2Q8IXL9 164 aa8.8□□□□□ -1
SRGAP1-205ENST00000542841 ZNF503Q96F45 646 aa8.8□□□□□ -1
SRGAP1-205ENST00000542841 NARS2Q96I59 477 aaKnown RBP8.8□□□□□ -1
SRGAP1-205ENST00000542841 UHRF2Q96PU4 802 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms