RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 SCRT1Q9BWW7 348 aa8.75□□□□□ -1.01
YBX3-213ENST00000542641 SLC25A32Q9H2D1 315 aa8.75□□□□□ -1.01
YBX3-213ENST00000542641 RNF24Q9Y225 148 aa8.75□□□□□ -1.01
YBX3-213ENST00000542641 IGKV3-7A0A075B6H7 116 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 IZUMO1RA6ND01 250 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 HELTA6NFD8 242 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 SPP1P10451 314 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 M6PRP20645 277 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 LCN12Q6JVE5 192 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 SIGLEC15Q6ZMC9 328 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 BAP18Q8IXM2 172 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 TMEM61Q8N0U2 210 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 GLMPQ8WWB7 406 aa8.74□□□□□ -1.01
YBX3-213ENST00000542641 TRAV25A0A0B4J276 109 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 BOLA2-SMG1P6H3BVE0 249 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 MBP02144 154 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 RAB2AP61019 212 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 PAFAH1B2P68402 229 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 GUCA2BQ16661 112 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 MORN5Q5VZ52 161 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 FAM90A2PQ658T7 463 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 OR10G4Q8NGN3 311 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 OR10G9Q8NGN4 311 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 OR10G7Q8NGN6 311 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 STOML3Q8TAV4 291 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 GPR82Q96P67 336 aa8.73□□□□□ -1.01
YBX3-213ENST00000542641 SEPSECSQ9HD40 501 aaKnown RBP8.73□□□□□ -1.01
YBX3-213ENST00000542641 ZMAT5Q9UDW3 170 aaKnown RBP8.73□□□□□ -1.01
YBX3-213ENST00000542641 TRAV5A0A0B4J249 113 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 A0A1W2PPV4 95 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 TSPAN4O14817 238 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 SEC11BP0C7V7 166 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 RPL7P18124 248 aaKnown RBP8.72□□□□□ -1.01
YBX3-213ENST00000542641 GALR1P47211 349 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 RHOBP62745 196 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 TMEM41BQ5BJD5 291 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 AKR1C8PQ5T2L2 129 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 MIR17HGQ75NE6 70 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 GBGT1Q8N5D6 347 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
YBX3-213ENST00000542641 MS4A6AQ9H2W1 248 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 FUT9Q9Y231 359 aa8.72□□□□□ -1.01
YBX3-213ENST00000542641 NOTCH3Q9UM47 2321 aa8.71□□□□□ -1.01
YBX3-213ENST00000542641 ZNF785A8K8V0 405 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 DNASE2O00115 360 aaPredicted RBP8.71□□□□□ -1.02
YBX3-213ENST00000542641 TFPI2P48307 235 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 EGFEM1PQ0D2K5 195 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 SPATA31B1PQ5VZV4 182 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 EIF5AL1Q6IS14 154 aaKnown RBP8.71□□□□□ -1.02
YBX3-213ENST00000542641 FAM122CQ6P4D5 195 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 BPIFA4PQ86YQ2 179 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 WFDC3Q8IUB2 231 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 RPP25LQ8N5L8 163 aaKnown RBP8.71□□□□□ -1.02
YBX3-213ENST00000542641 STXBP6Q8NFX7 210 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 TMED6Q8WW62 240 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 SPAG8Q99932 426 aaPredicted RBP8.71□□□□□ -1.02
YBX3-213ENST00000542641 RPRMQ9NS64 109 aa8.71□□□□□ -1.02
YBX3-213ENST00000542641 ZNF256Q9Y2P7 627 aaPredicted RBP8.71□□□□□ -1.02
YBX3-213ENST00000542641 OR4C46A6NHA9 309 aa8.7□□□□□ -1.02
YBX3-213ENST00000542641 GP9P14770 177 aa8.7□□□□□ -1.02
YBX3-213ENST00000542641 ATF4P18848 351 aaPredicted RBP8.7□□□□□ -1.02
YBX3-213ENST00000542641 KRTAP10-11P60412 298 aa8.7□□□□□ -1.02
YBX3-213ENST00000542641 ACTR3CQ9C0K3 210 aaPredicted RBP8.7□□□□□ -1.02
YBX3-213ENST00000542641 SMAD5-AS1Q9Y6J3 95 aa8.7□□□□□ -1.02
YBX3-213ENST00000542641 UMAD1C9J7I0 102 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
YBX3-213ENST00000542641 EIF3GO75821 320 aaKnown RBP eCLIP8.69□□□□□ -1.02
YBX3-213ENST00000542641 CDC34P49427 236 aaPredicted RBP8.69□□□□□ -1.02
YBX3-213ENST00000542641 TAS2R45P59539 299 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 BEAN1Q3B7T3 259 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 KPRPQ5T749 579 aaPredicted RBP8.69□□□□□ -1.02
YBX3-213ENST00000542641 RAB24Q969Q5 203 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 SLC25A2Q9BXI2 301 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 NRN1Q9NPD7 142 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 TMEM14CQ9P0S9 112 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 MGAM2Q2M2H8 2515 aa8.69□□□□□ -1.02
YBX3-213ENST00000542641 TRAV2A0A0B4J234 112 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 HMGB3O15347 200 aaKnown RBP8.68□□□□□ -1.02
YBX3-213ENST00000542641 OR7C2O60412 319 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 SNRPCP09234 159 aaKnown RBP8.68□□□□□ -1.02
YBX3-213ENST00000542641 PYYP10082 97 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 MEOX2P50222 304 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 KHDC3LQ587J8 217 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 GTSCR1Q86UQ5 136 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 LRRC20Q8TCA0 184 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 DCANP1Q8TF63 244 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 PRR25Q96S07 402 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 PAXXQ9BUH6 204 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 OR51M1Q9H341 326 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 HRH4Q9H3N8 390 aa8.68□□□□□ -1.02
YBX3-213ENST00000542641 A0A087X0K7 114 aa8.67□□□□□ -1.02
YBX3-213ENST00000542641 CTXND1A0A1B0GTU2 59 aa8.67□□□□□ -1.02
YBX3-213ENST00000542641 H3BQ15 152 aa8.67□□□□□ -1.02
YBX3-213ENST00000542641 K7EQG2 157 aa8.67□□□□□ -1.02
YBX3-213ENST00000542641 IGLC2P0DOY2 106 aa8.67□□□□□ -1.02
YBX3-213ENST00000542641 FHITP49789 147 aa8.67□□□□□ -1.02
YBX3-213ENST00000542641 CD81P60033 236 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms