RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	S100A11	P31949	105 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	H2BFS	P57053	126 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	RAP2B	P61225	183 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	CSNK1G2-AS1	Q8NCQ2	148 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	OR11H2	Q8NH07	326 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	ARL6	Q9H0F7	186 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	WDR83OS	Q9Y284	106 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	HLA-DRB4	X5D2U9	266 aa		11.26	□□□□□ -0.61
ECHDC2-223	ENST00000542552	CYCS	P99999	105 aa	Known RBP	11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552	GDF5OS	Q5U4N7	250 aa		11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552	FOXI2	Q6ZQN5	318 aa		11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552	TMEM217	Q8N7C4	229 aa		11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552	LINC00052	Q96N35	136 aa		11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552	CLUHP3	Q96NS8	147 aa		11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552	UHRF2	Q96PU4	802 aa		11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552	SAV1	Q9H4B6	383 aa	Predicted RBP	11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552	UQCC1	Q9NVA1	299 aa		11.25	□□□□□ -0.61
ECHDC2-223	ENST00000542552		H0YIZ8	118 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	OR5G3	P0C626	314 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	RPL7	P18124	248 aa	Known RBP	11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	DEFB1	P60022	68 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	S100A7A	Q86SG5	101 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	STX12	Q86Y82	276 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	CHAC2	Q8WUX2	184 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	C16orf92	Q96LL3	132 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	C20orf173	Q96LM9	149 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	ARV1	Q9H2C2	271 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	C11orf68	Q9H3H3	251 aa	Known RBP	11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	ALMS1	Q8TCU4	4167 aa		11.24	□□□□□ -0.61
ECHDC2-223	ENST00000542552	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552		E5RGE8	158 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	MRPS12	O15235	138 aa	Known RBP	11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	CAMLG	P49069	296 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	HBG1	P69891	147 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	HBG2	P69892	147 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	PRR20E	P86478	221 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	PRR20C	P86479	221 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	PRR20D	P86480	221 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	PRR20B	P86481	221 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	PRR20A	P86496	221 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	RAB31	Q13636	194 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	ATP6V1F	Q16864	119 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	SPATA31B1P	Q5VZV4	182 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	TMEM37	Q8WXS4	190 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	OR5AC2	Q9NZP5	309 aa		11.23	□□□□□ -0.61
ECHDC2-223	ENST00000542552	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552		A0A087X0K7	114 aa		11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552	TRAV8-2	A0A0B4J237	113 aa		11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552	SSNA1	O43805	119 aa		11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552	RLN2	P04090	185 aa		11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552	NUTF2	P61970	127 aa	Known RBP	11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552		Q8NAQ8	132 aa		11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552	RPRM	Q9NS64	109 aa		11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552	RNF24	Q9Y225	148 aa		11.22	□□□□□ -0.61
ECHDC2-223	ENST00000542552	HYDIN	Q4G0P3	5121 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552		A0A0J9YX75	114 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552		A8MTW9	85 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	PTTG1	O95997	202 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	RPL29	P47914	159 aa	Known RBP	11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	NHLH2	Q02577	135 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	LINC00305	Q7Z4B0	112 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	PPP1R1C	Q8WVI7	109 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	RNF126	Q9BV68	326 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	C1QTNF4	Q9BXJ3	329 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	DNAJC4	Q9NNZ3	241 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	CLEC5A	Q9NY25	188 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552		X6R8D5	127 aa		11.21	□□□□□ -0.61
ECHDC2-223	ENST00000542552	LCE6A	A0A183	80 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	UBE2L5P	A0A1B0GUS4	154 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552		F6UB75	175 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	COX7A2P2	O60397	106 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	OPCML	Q14982	345 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	LRRC37A5P	Q49AS3	106 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	FAM78B	Q5VT40	261 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	MORN5	Q5VZ52	161 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	C10orf113	Q5VZT2	155 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	MIC13	Q5XKP0	118 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	ZNF709	Q8N972	641 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	SLC25A31	Q9H0C2	315 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	XCL2	Q9UBD3	114 aa		11.2	□□□□□ -0.62
ECHDC2-223	ENST00000542552	MPDU1	O75352	247 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	RBMY1A1	P0DJD3	496 aa	Known RBP	11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	RBMY1C	P0DJD4	496 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	MIF	P14174	115 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	BAX	Q07812	192 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	RBMY1F	Q15415	496 aa	Known RBP	11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	IGFL4	Q6B9Z1	124 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	EBLN2	Q6P2I7	272 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552		Q6ZRG5	221 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	OR5C1	Q8NGR4	320 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	SLC39A9	Q9NUM3	307 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	ALG5	Q9Y673	324 aa		11.19	□□□□□ -0.62
ECHDC2-223	ENST00000542552	IGHV4-28	A0A0C4DH34	117 aa		11.18	□□□□□ -0.62
ECHDC2-223	ENST00000542552	CXorf65	A6NEN9	183 aa		11.18	□□□□□ -0.62
ECHDC2-223	ENST00000542552	DEFB4A	O15263	64 aa		11.18	□□□□□ -0.62
ECHDC2-223	ENST00000542552	MPC2	O95563	127 aa		11.18	□□□□□ -0.62
ECHDC2-223	ENST00000542552	IGKV3-20	P01619	116 aa		11.18	□□□□□ -0.62
ECHDC2-223	ENST00000542552	FGF7	P21781	194 aa		11.18	□□□□□ -0.62
ECHDC2-223	ENST00000542552	AMTN	Q6UX39	209 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms