RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 TMEM86BQ8N661 226 aa8.98□□□□□ -0.97
CDH3-203ENST00000542274 TMEM252Q8N6L7 170 aa8.98□□□□□ -0.97
CDH3-203ENST00000542274 C9orf106Q8NAJ2 232 aa8.98□□□□□ -0.97
CDH3-203ENST00000542274 UBALD1Q8TB05 177 aa8.98□□□□□ -0.97
CDH3-203ENST00000542274 KLK5Q9Y337 293 aaPredicted RBP8.98□□□□□ -0.97
CDH3-203ENST00000542274 FAM236AA0A1B0GUQ0 79 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 FAM236BA0A1B0GV22 79 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 CRLF1O75462 422 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 SCTP09683 121 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 IGFL3Q6UXB1 125 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 C20orf204Q6ZNR8 217 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 RDH5Q92781 318 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 FZR1Q9UM11 496 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 E9PLD3 99 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 KIR2DS2P43631 304 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 NMUP48645 174 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 LYZL2Q7Z4W2 148 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 WDR86Q86TI4 376 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 TRPT1Q86TN4 253 aaKnown RBP8.97□□□□□ -0.97
CDH3-203ENST00000542274 RPRMLQ8N4K4 120 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 OR10J6PQ8NGY7 276 aa8.97□□□□□ -0.97
CDH3-203ENST00000542274 A1L4Q6 167 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 TMEM262E9PQX1 116 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 SPINK4O60575 86 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 ACTL6BO94805 426 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 MGST1P10620 155 aaKnown RBP8.96□□□□□ -0.97
CDH3-203ENST00000542274 NPPCP23582 126 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 CAMPP49913 170 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 Q6ZQT7 251 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 IL17DQ8TAD2 202 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 CADP27708 2225 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 NBASA2RRP1 2371 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 TPRP12270 2363 aaKnown RBP8.96□□□□□ -0.97
CDH3-203ENST00000542274 DYSFO75923 2080 aa8.96□□□□□ -0.97
CDH3-203ENST00000542274 TFF1P04155 84 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 ARL16Q0P5N6 197 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 ZC2HC1BQ5TFG8 222 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 Q5XG85 94 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 CXorf67Q86X51 503 aaPredicted RBP8.96□□□□□ -0.98
CDH3-203ENST00000542274 COQ2Q96H96 371 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 TCF19Q9Y242 345 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 CRYM-AS1A6NIL9 109 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 ZG16O60844 167 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 ZNF688P0C7X2 276 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 TAS2R45P59539 299 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 RPL31P62899 125 aaKnown RBP8.96□□□□□ -0.98
CDH3-203ENST00000542274 FAM27E3Q08E93 113 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 C6orf226Q5I0X4 101 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 C9orf153Q5TBE3 101 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 GATD1Q8NB37 220 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 PPDPFLQ8WWR9 84 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 CARD19Q96LW7 228 aa8.96□□□□□ -0.98
CDH3-203ENST00000542274 TMEM89A2RUT3 159 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 FGF12P61328 243 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 FAM214BQ7L5A3 538 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 C10orf126Q8N4M7 172 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 OR4X2Q8NGF9 303 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 CHCHD5Q9BSY4 110 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 FBXL15Q9H469 300 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 IGKV1-6A0A0C4DH72 117 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 K7ENP7 123 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 CRYAAP02489 173 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 APCSP02743 223 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 MPV17P39210 176 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 SSX8Q7RTT4 187 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 PHLDA1Q8WV24 401 aaPredicted RBP8.95□□□□□ -0.98
CDH3-203ENST00000542274 TIMD4Q96H15 378 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 C11orf1Q9H5F2 150 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 SLC39A9Q9NUM3 307 aa8.95□□□□□ -0.98
CDH3-203ENST00000542274 ICE1Q9Y2F5 2266 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 IGKV1D-13A0A0B4J2D9 117 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 IGKV1-13P0DP09 117 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 ABCA11PQ4W5N1 156 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 FAM120AOSQ5T036 256 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 TNFRSF19Q9NS68 423 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 PROCRQ9UNN8 238 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 PPYP01298 95 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 SMCPP49901 116 aaPredicted RBP8.94□□□□□ -0.98
CDH3-203ENST00000542274 GUSBP1Q15486 140 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 ZNF718Q3SXZ3 478 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 SEM1Q6ZVN7 128 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 ODF3L1Q8IXM7 274 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 MKXQ8IYA7 352 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 LRRC29Q8WV35 223 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 KLF12Q9Y4X4 402 aa8.94□□□□□ -0.98
CDH3-203ENST00000542274 HEATR1Q9H583 2144 aaKnown RBP8.94□□□□□ -0.98
CDH3-203ENST00000542274 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 SH2D7A6NKC9 451 aaPredicted RBP8.93□□□□□ -0.98
CDH3-203ENST00000542274 GGTLC3B5MD39 225 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 IGLL5B9A064 214 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 SSSCA1O60232 199 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 APOHP02749 345 aaPredicted RBP8.93□□□□□ -0.98
CDH3-203ENST00000542274 GRPP07492 148 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 GCSHP23434 173 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 FXYD2P54710 66 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 TMEM187Q14656 261 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 VWC2Q2TAL6 325 aa8.93□□□□□ -0.98
CDH3-203ENST00000542274 ZNF826PQ6ZT77 177 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms