RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CECR9P0C854 216 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 SMIM17P0DL12 118 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 CT45A6P0DMU7 189 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 CT45A5P0DMU8 189 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 CT45A7P0DMV0 189 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 IGHV3-43DP0DP04 118 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 CD33P20138 364 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 FOXA3P55318 350 aaPredicted RBP8.37□□□□□ -1.07
CHFR-219ENST00000541341 RPS16P62249 146 aaKnown RBP8.37□□□□□ -1.07
CHFR-219ENST00000541341 SLAQ13239 276 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 EDDM3AQ14507 147 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 FXYD3Q14802 87 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 KIAA1644Q3SXP7 199 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 CT45A1Q5HYN5 189 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 TMEM108Q6UXF1 575 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 TCF24Q7RTU0 167 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 ZNF329Q86UD4 541 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 CD177Q8N6Q3 437 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 OR4X2Q8NGF9 303 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 OR2T6Q8NHC8 308 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 CT45A3Q8NHU0 189 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 PRSS22Q9GZN4 317 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 CST9LQ9H4G1 147 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 WASHC3Q9Y3C0 194 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 MALRD1Q5VYJ5 2156 aa8.37□□□□□ -1.07
CHFR-219ENST00000541341 IGHV4-30-2A0A087WSY4 118 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 TEX50A0A1B0GTY4 177 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 NUDT3O95989 172 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 IGHV3-13P01766 116 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 CT45A10P0DMU9 189 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 RNASE2P10153 161 aaKnown RBP8.36□□□□□ -1.07
CHFR-219ENST00000541341 CD40P25942 277 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 GPR183P32249 361 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 LGALS7P47929 136 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 TCL1AP56279 114 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 RPL8P62917 257 aaKnown RBP8.36□□□□□ -1.07
CHFR-219ENST00000541341 VMA21Q3ZAQ7 101 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 TMEM177Q53S58 311 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 BVES-AS1Q5T3Y7 98 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 SPATA31B1PQ5VZV4 182 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 UNQ5815/PRO19632Q6UWF5 114 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 IL17RELQ6ZVW7 336 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 LYG1Q8N1E2 194 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 LYPD1Q8N2G4 141 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 ZCCHC24Q8N2G6 241 aaKnown RBP8.36□□□□□ -1.07
CHFR-219ENST00000541341 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 GATD1Q8NB37 220 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 OR4C13Q8NGP0 309 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 TMEM186Q96B77 213 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 C1orf159Q96HA4 380 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 TRGV9Q99603 122 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 HINT2Q9BX68 163 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 SLC25A2Q9BXI2 301 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 NPFFR1Q9GZQ6 430 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 ZNF355PQ9NSJ1 428 aa8.36□□□□□ -1.07
CHFR-219ENST00000541341 LOC102724200A0A096LPH7 203 aaPredicted RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 GAGE10A6NGK3 116 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 F2Z2F3 143 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 H3BRM9 83 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 J3QR89 54 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 M0R1B8 84 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 OVOL3O00110 214 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 NDUFS8O00217 210 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 WNT9BO14905 357 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 PROP1O75360 226 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 LHBP01229 141 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 SLC25A5P05141 298 aaKnown RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 SAA2P0DJI9 122 aaPredicted RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 COX8AP10176 69 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 SCGB1A1P11684 91 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 DEFA4P12838 97 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 CEBPDP49716 269 aaPredicted RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 PLP1P60201 277 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 ZNF672Q499Z4 452 aaPredicted RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 RPL39P5Q59GN2 51 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 EBLN2Q6P2I7 272 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 NUP37Q8NFH4 326 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 TMEM167AQ8TBQ9 72 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 H1FXQ92522 213 aaKnown RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 FLYWCH2Q96CP2 140 aaKnown RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 FAM167A-AS1Q96KT0 104 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 SCRT2Q9NQ03 307 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 NDUFA4L2Q9NRX3 87 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 TMEM14CQ9P0S9 112 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 RNF7Q9UBF6 113 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 RPUSD1Q9UJJ7 312 aaKnown RBP8.35□□□□□ -1.07
CHFR-219ENST00000541341 LINC00312Q9Y6C7 94 aa8.35□□□□□ -1.07
CHFR-219ENST00000541341 SVEP1Q4LDE5 3571 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 IGKV1D-17A0A075B6S4 117 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 LOC105371242A0A075B767 164 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 TRAV34A0A0B4J273 112 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 PSMB11A5LHX3 300 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 SHISA9B4DS77 424 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 CIDEAO60543 219 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 SPINK4O60575 86 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 LY6HO94772 140 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 LTAP01374 205 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 GLRXP35754 106 aa8.34□□□□□ -1.07
CHFR-219ENST00000541341 MYCNOSP40205 109 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms