RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ORM2P19652 201 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 OR10J3Q5JRS4 329 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 OR10X1Q8NGY0 326 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 NCOR1P1Q9H4R4 102 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 FOXA2Q9Y261 457 aaPredicted RBP11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 E7EUB6 86 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 HCP5Q6MZN7 132 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 C19orf35Q6ZS72 473 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 NPIPB3Q92617 1050 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 CORO2AQ92828 525 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 TXNDC17Q9BRA2 123 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
SFSWAP-210ENST00000541286 NF1P21359 2839 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 UPK2O00526 184 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 TAS2R45P59539 299 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 GNG5P63218 68 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 PRR20EP86478 221 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 PRR20CP86479 221 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 PRR20DP86480 221 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 PRR20BP86481 221 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 PRR20AP86496 221 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 LYPD2Q6UXB3 125 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 PERPQ96FX8 193 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 GAFA1Q96PS6 74 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 FAM90A9PA6NNJ1 464 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 H0YJW9 148 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 WDR73Q6P4I2 378 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 TCF24Q7RTU0 167 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
SFSWAP-210ENST00000541286 C2orf70A6NJV1 201 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 K7ERU9 68 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 FCN3O75636 299 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 MOSP00540 346 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 TM4SF20Q53R12 229 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 LRRC10Q5BKY1 277 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 CLUHP3Q96NS8 147 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 SLC25A10Q9UBX3 287 aaPredicted RBP11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 GAGE10A6NGK3 116 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 COX6B1P14854 86 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 ERHP84090 104 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 PRCDQ00LT1 54 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 OR1N2Q8NGR9 330 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 C8orf88P0DMB2 117 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 FXYD7P58549 80 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 ASCL2Q99929 193 aa11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-210ENST00000541286 hADV38S2A0JD32 116 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 FAM231BA6NCW3 169 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 AREGP15514 252 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 FAM222BQ8WU58 562 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 IGFBPL1Q8WX77 278 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 ADTRPQ96IZ2 230 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 TMEM70Q9BUB7 260 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 SLC25A17O43808 307 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 SLC25A34Q6PIV7 304 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 PSMG3-AS1Q96PY0 264 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 HLA-DQA1P01909 254 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 TEX45Q8NA69 505 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 NUP35Q8NFH5 326 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 FLYWCH2Q96CP2 140 aaKnown RBP11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 RAB9BQ9NP90 201 aa11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 RPUSD1Q9UJJ7 312 aaKnown RBP11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 AMMECR1Q9Y4X0 333 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-210ENST00000541286 C7orf71A4D174 169 aa11.46□□□□□ -0.57
SFSWAP-210ENST00000541286 LHBP01229 141 aa11.46□□□□□ -0.57
SFSWAP-210ENST00000541286 CGB3P0DN86 165 aa11.46□□□□□ -0.57
SFSWAP-210ENST00000541286 CGB7P0DN87 165 aa11.46□□□□□ -0.57
SFSWAP-210ENST00000541286 RNASE2P10153 161 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-210ENST00000541286 TMEM249Q2WGJ8 235 aa11.46□□□□□ -0.57
SFSWAP-210ENST00000541286 OR1B1Q8NGR6 318 aa11.46□□□□□ -0.57
SFSWAP-210ENST00000541286 HIGD1CA8MV81 97 aa11.46□□□□□ -0.58
SFSWAP-210ENST00000541286 H3BUT2 72 aa11.46□□□□□ -0.58
SFSWAP-210ENST00000541286 C3orf36Q3SXR2 165 aa11.46□□□□□ -0.58
SFSWAP-210ENST00000541286 OR5B3Q8NH48 314 aa11.46□□□□□ -0.58
SFSWAP-210ENST00000541286 SLC25A33Q9BSK2 321 aa11.46□□□□□ -0.58
SFSWAP-210ENST00000541286 B9A039 149 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 C9JCJ5 164 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 MT-ND6P03923 174 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 CD69Q07108 199 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 WFDC12Q8WWY7 111 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 PAXXQ9BUH6 204 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 VWC2LB2RUY7 222 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 CIDEAO60543 219 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 C10orf113Q5VZT2 155 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 C11orf71Q6IPW1 123 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 TPSG1Q9NRR2 321 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 MAST4O15021 2626 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 K7EMI3 77 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 RPL24P83731 157 aaKnown RBP11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 PNKDQ8N490 385 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 OR1L8Q8NGR8 309 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 URB1-AS1Q96HZ7 61 aa11.45□□□□□ -0.58
SFSWAP-210ENST00000541286 HSBP1L1C9JCN9 74 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 LEPROTL1O95214 131 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 IGLV2-8P01709 118 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 RHOGP84095 191 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 PRSS57Q6UWY2 283 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 ZNF788Q6ZQV5 615 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 SLC25A48Q6ZT89 311 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms