RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 KLHL30-AS1Q8NEE0 82 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 MBD3L1Q8WWY6 194 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 TMEM37Q8WXS4 190 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 NARS2Q96I59 477 aaKnown RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 UHRF2Q96PU4 802 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 METTL26Q96S19 204 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 MRPL32Q9BYC8 188 aaKnown RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 MAP1LC3BQ9GZQ8 125 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 TMPRSS5Q9H3S3 457 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 SEPSECSQ9HD40 501 aaKnown RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 TECRQ9NZ01 308 aaKnown RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 RABAC1Q9UI14 185 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 TSSC4Q9Y5U2 329 aaPredicted RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 DNHD1Q96M86 4753 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 IGHV4OR15-8A0A075B7B6 117 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 A0A087WW49 117 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 TRAV5A0A0B4J249 113 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 SEC14L6B5MCN3 397 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 LINC01619G3V211 115 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 OR7C2O60412 319 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 CXorf1O96002 111 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 C8orf88P0DMB2 117 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 NPPCP23582 126 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 PROK1P58294 105 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 PLP1P60201 277 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 USF2Q15853 346 aaPredicted RBP5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 ZNF726P1Q15940 193 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 DEFB136Q30KP8 78 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 KHDC3LQ587J8 217 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 AWAT1Q58HT5 328 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 SPATA31B1PQ5VZV4 182 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 LEMD1Q68G75 181 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 IL34Q6ZMJ4 242 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 OR11H1Q8NG94 326 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 OR1N2Q8NGR9 330 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 MYOZ3Q8TDC0 251 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 C4orf3Q8WVX3 66 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 GRAMD2BQ96HH9 432 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 CITED2Q99967 270 aaPredicted RBP5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 SLC25A39Q9BZJ4 359 aaPredicted RBP5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 RNF24Q9Y225 148 aa5.1□□□□□ -1.59
CLTCL1-206ENST00000540896 IGHV3-49A0A0A0MS15 119 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 TRAV1-1A0A0B4J248 108 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 ZNF98A6NK75 572 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 I3L521 148 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 IFNA1P01562 189 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 ARL14EPLP0DKL9 152 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 ZP3P21754 424 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 HOXD3P31249 432 aaPredicted RBP5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 KRTAP10-2P60368 255 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 CCL20P78556 96 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 NDUFA5Q16718 116 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 NSUN5P1Q3KNT7 163 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 C12orf54Q6X4T0 127 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 C18orf65Q6ZTR6 163 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 SSX7Q7RTT5 188 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 COMMD7Q86VX2 200 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 GPHB5Q86YW7 130 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 OR8I2Q8N0Y5 310 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 C3orf56Q8N813 242 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 STXBP6Q8NFX7 210 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 WIPF2Q8TF74 440 aaPredicted RBP5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 MARC2Q969Z3 335 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 SPATA25Q9BR10 227 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 SHANK2-AS3Q9BTD1 123 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 PAXXQ9BUH6 204 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 SCRT1Q9BWW7 348 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 MRPL27Q9P0M9 148 aaKnown RBP5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 GNG13Q9P2W3 67 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 UFC1Q9Y3C8 167 aa5.09□□□□□ -1.59
CLTCL1-206ENST00000540896 IGHV3OR16-13A0A075B7E8 117 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 IGHV3-74A0A0B4J1X5 117 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 IGHV3-66A0A0C4DH42 116 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 A0A1W2PS18 150 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 ZNF785A8K8V0 405 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 M0QZ24 198 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 CCL24O00175 119 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 PLA2G1BP04054 148 aaKnown RBP5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 OR10J4P0C629 311 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 STAG3L2P0CL84 134 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 STAG3L3P0CL85 134 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 GCHFRP30047 84 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 BMI1P35226 326 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 PSMB3P49720 205 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 PPT1P50897 306 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 SYNJ2BPP57105 145 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 RPL11P62913 178 aaKnown RBP5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 UBE2L3P68036 154 aaKnown RBP5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 HAGHQ16775 308 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 MORN5Q5VZ52 161 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 CST9LP1Q5W188 147 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 UNQ9165/PRO28630Q6UXU0 137 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 PQLC2Q6ZP29 291 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 BPIFA4PQ86YQ2 179 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 SLC7A5P1Q8MH63 180 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 OR4F17Q8NGA8 305 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 TMEM190Q8WZ59 177 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 DUX3Q96PT4 197 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 OR4F4Q96R69 305 aa5.08□□□□□ -1.6
CLTCL1-206ENST00000540896 SLC25A2Q9BXI2 301 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms