RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 TRGV8A0A0C4DH27 118 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 C9JAW5 83 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 CCL2P13500 99 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 SUPT4H1P63272 117 aaKnown RBP4.99□□□□□ -1.61
PTPRD-214ENST00000540109 VKORC1L1Q8N0U8 176 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 HLA-DRB4P13762 266 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 DEFB108BQ8NET1 73 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 SCGB3A1Q96QR1 104 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 HLA-DRB4X5D2U9 266 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 PCNTO95613 3336 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 PRR33A8MZF0 331 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 IGLC1P0CG04 106 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 CFHR2P36980 270 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 HIST1H4AP62805 103 aaKnown RBP4.99□□□□□ -1.61
PTPRD-214ENST00000540109 ZNF714Q96N38 554 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 TECTAO75443 2155 aa4.99□□□□□ -1.61
PTPRD-214ENST00000540109 APELAP0DMC3 54 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 TMEM170BQ5T4T1 132 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 CENPVQ7Z7K6 275 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-214ENST00000540109 HAPLN4Q86UW8 402 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 NPIPB3Q92617 1050 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 TCF19Q9Y242 345 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 FAM157AC9JC47 383 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 ATOX1O00244 68 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 UPK2O00526 184 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 ZNF688P0C7X2 276 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 SPANXN1Q5VSR9 72 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 Q71RC1 249 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-214ENST00000540109 FAM214BQ7L5A3 538 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 F2RL2O00254 374 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 CRIP3Q6Q6R5 217 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 IGFL3Q6UXB1 125 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 Q6ZT83 130 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 ABHD12Q8N2K0 398 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 GLMPQ8WWB7 406 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 COQ2Q96H96 371 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 PCNX3Q9H6A9 2034 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 GGTLC3B5MD39 225 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 PAX1P15863 534 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 SPEM2Q0P670 501 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 ZNF837Q96EG3 531 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-214ENST00000540109 ZNF488Q96MN9 340 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 PROCRQ9UNN8 238 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 RS1O15537 224 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 NDUFB8O95169 186 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 C1QL2Q7Z5L3 287 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 PSG8Q9UQ74 426 aa4.98□□□□□ -1.61
PTPRD-214ENST00000540109 MOSP00540 346 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 PRB1P04280 392 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 NMSQ5H8A3 153 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 TMEM78Q5T7P6 136 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 C2orf82Q6UX34 121 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 TMEM171Q8WVE6 324 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 RCHY1Q96PM5 261 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 URB1O60287 2271 aaKnown RBP4.97□□□□□ -1.61
PTPRD-214ENST00000540109 RBMY1BA6NDE4 496 aaKnown RBP4.97□□□□□ -1.61
PTPRD-214ENST00000540109 RBMY1EA6NEQ0 496 aaKnown RBP4.97□□□□□ -1.61
PTPRD-214ENST00000540109 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 M0R2P5 195 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 RBMY1DP0C7P1 496 aaKnown RBP4.97□□□□□ -1.61
PTPRD-214ENST00000540109 RBMY1A1P0DJD3 496 aaKnown RBP4.97□□□□□ -1.61
PTPRD-214ENST00000540109 RBMY1CP0DJD4 496 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 TNFAIP6P98066 277 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-214ENST00000540109 IL15RAQ13261 267 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 WFDC2Q14508 124 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 MIR17HGQ75NE6 70 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 C5orf24Q7Z6I8 188 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 NUP35Q8NFH5 326 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 TRBV20OR9-2A0A075B6H5 130 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 E9PLN8 166 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 TIMM23O14925 209 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 IFI27L2Q9H2X8 130 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 KNTC1P50748 2209 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 A0A1W2PNU3 283 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-214ENST00000540109 IQCF6A8MYZ5 107 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 NDUFB3O43676 98 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 JMJD8Q96S16 334 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 IMUPQ9GZP8 106 aa4.97□□□□□ -1.61
PTPRD-214ENST00000540109 IGKV1-27A0A075B6S5 117 aa4.96□□□□□ -1.61
PTPRD-214ENST00000540109 TM4SF5O14894 197 aa4.96□□□□□ -1.61
PTPRD-214ENST00000540109 C5orf64Q2M2E5 130 aa4.96□□□□□ -1.61
PTPRD-214ENST00000540109 CNEP1R1Q8N9A8 125 aa4.96□□□□□ -1.61
PTPRD-214ENST00000540109 C15orf53Q8NAA6 179 aa4.96□□□□□ -1.61
PTPRD-214ENST00000540109 SLC50A1Q9BRV3 221 aa4.96□□□□□ -1.61
PTPRD-214ENST00000540109 U3KQE9 123 aa4.96□□□□□ -1.61
PTPRD-214ENST00000540109 BRCA2P51587 3418 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 ZNHIT1O43257 154 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 NTF4P34130 210 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 PVRIGQ6DKI7 326 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 FAM159AQ6UWV7 190 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 SPATA12Q7Z6I5 190 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 RPP25LQ8N5L8 163 aaKnown RBP4.96□□□□□ -1.62
PTPRD-214ENST00000540109 TNRC6AQ8NDV7 1962 aaKnown RBP4.96□□□□□ -1.62
PTPRD-214ENST00000540109 SDK2Q58EX2 2172 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 RPL32P62910 135 aaKnown RBP4.96□□□□□ -1.62
PTPRD-214ENST00000540109 GOLT1AQ6ZVE7 132 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 A0A1W2PPI3 338 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 F5H768 121 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 CD24P25063 80 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms