RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SULT1A3P0DMM9 295 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 SULT1A4P0DMN0 295 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 PSG1P11464 419 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 ANXA3P12429 323 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 NUP62P37198 522 aaPredicted RBP8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 SUPT4H1P63272 117 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 FCN2Q15485 313 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 C2orf83Q53S99 150 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 ETFRF1Q6IPR1 90 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 SSX7Q7RTT5 188 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 AKAP14Q86UN6 197 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 OR11H7Q8NGC8 314 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 OR51G1Q8NGK1 321 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 OR52E5Q8NH55 327 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 MITD1Q8WV92 249 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 NPIPB3Q92617 1050 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 RRNAD1Q96FB5 475 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 IGF2BP2-AS1Q96M15 143 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 HEYLQ9NQ87 328 aaPredicted RBP8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 KCNIP3Q9Y2W7 256 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 A0A0B4J2A0 478 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 A0A0G2JRQ6 117 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 C3orf85A0A1B0GTC6 90 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 ISLRO14498 428 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 CCNKO75909 580 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 NXPH3O95157 252 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 PRM2P04554 102 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 ATP5G1P05496 136 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 ATP5G3P48201 142 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 CLINT1Q14677 625 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 AARDQ4LEZ3 155 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 TTC32Q5I0X7 151 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 LYPD1Q8N2G4 141 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 MGAT4CQ9UBM8 478 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 SHPKQ9UHJ6 478 aa8.1□□□□□ -1.11
CLSTN3-209ENST00000539982 CBY3A6NI87 242 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 A8MTW9 85 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 ZNF705GA8MUZ8 300 aaPredicted RBP8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 B3GALNT1O75752 331 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 OR5AC1P0C628 307 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 TSPOP30536 169 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 SRPXP78539 464 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 SP6Q3SY56 376 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 C1orf194Q5T5A4 169 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 OR8G2PQ6IF36 304 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 SLC24A4Q8NFF2 622 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 RNF141Q8WVD5 230 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 RNF125Q96EQ8 232 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 ACY3Q96HD9 319 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 KRTAP1-5Q9BYS1 174 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 Q9H3A6 140 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 RPRMQ9NS64 109 aa8.09□□□□□ -1.11
CLSTN3-209ENST00000539982 A0A1W2PPQ1 181 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 GOSR2O14653 212 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 CXCL3P19876 107 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 XGP55808 180 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 B2MP61769 119 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 AMTNQ6UX39 209 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 FAM219AQ8IW50 185 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 LGI3Q8N145 548 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 RNASE11Q8TAA1 199 aaKnown RBP8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 TMEM170AQ8WVE7 144 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 PPP1R14BQ96C90 147 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 GPR146Q96CH1 333 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 ST6GAL2Q96JF0 529 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 PBDC1Q9BVG4 233 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 TMEM222Q9H0R3 208 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 PRR13Q9NZ81 148 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 DOK5Q9P104 306 aa8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 SRRM2Q9UQ35 2752 aaKnown RBP8.08□□□□□ -1.12
CLSTN3-209ENST00000539982 PIGBOS1A0A0B4J2F0 54 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 PLAC8L1A1L4L8 177 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 UCP1P25874 307 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 DLK1P80370 383 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 SAMD13Q5VXD3 122 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 NOXA1Q86UR1 476 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 LRTM2Q8N967 370 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 GLYATL2Q8WU03 294 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 FRZBQ92765 325 aa8.07□□□□□ -1.12
CLSTN3-209ENST00000539982 CEBPZOSA8MTT3 80 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 CRXO43186 299 aaPredicted RBP8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 CDS2O95674 445 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 INSP01308 110 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 GIPP09681 153 aaPredicted RBP8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 AZU1P20160 251 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 CD300CQ08708 224 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 Q5VSD8 79 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 TCTE3Q8IZS6 198 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 OR8I2Q8N0Y5 310 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 ASB13Q8WXK3 278 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 IL22RA2Q969J5 263 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 C16orf92Q96LL3 132 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 C20orf173Q96LM9 149 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 UPK3BQ9BT76 320 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 TMEM56-RWDD3S4R434 201 aa8.06□□□□□ -1.12
CLSTN3-209ENST00000539982 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms