RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SLC25A2Q9BXI2 301 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 DAZ1Q9NQZ3 744 aaKnown RBP8.15□□□□□ -1.1
LEMD3-202ENST00000539442 TMEM14CQ9P0S9 112 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 U3KQE9 123 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 JMJD1CQ15652 2540 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 A0A1W2PRX2 142 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 A0A1W2PS18 150 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 ZNF320A2RRD8 509 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 BUB3O43684 328 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 OR7C2O60412 319 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 IFNA1P01562 189 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 GCHFRP30047 84 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 BMI1P35226 326 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 FGF8P55075 233 aaPredicted RBP8.14□□□□□ -1.11
LEMD3-202ENST00000539442 KRTAP10-3P60369 221 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 KLF5Q13887 457 aaPredicted RBP8.14□□□□□ -1.11
LEMD3-202ENST00000539442 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 BPIFA4PQ86YQ2 179 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 SCRT1Q9BWW7 348 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 KRTAP4-2Q9BYR5 136 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 OR51M1Q9H341 326 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 TMEM167BQ9NRX6 74 aa8.14□□□□□ -1.11
LEMD3-202ENST00000539442 NIPBLQ6KC79 2804 aaeCLIP8.13□□□□□ -1.11
LEMD3-202ENST00000539442 IGHV3OR16-8A0A075B7F1 116 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 TRAV5A0A0B4J249 113 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 IGHV7-4-1A0A0J9YVY3 117 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 A0A1B0GV50 99 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 RAB19A4D1S5 217 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 ADARB2-AS1A8MUL3 147 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 CCL24O00175 119 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 EIF3GO75821 320 aaKnown RBP eCLIP8.13□□□□□ -1.11
LEMD3-202ENST00000539442 GP9P14770 177 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 RPL7P18124 248 aaKnown RBP8.13□□□□□ -1.11
LEMD3-202ENST00000539442 TAGLN2P37802 199 aaKnown RBP8.13□□□□□ -1.11
LEMD3-202ENST00000539442 MYCNOSP40205 109 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 SYNJ2BPP57105 145 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 UBE2L3P68036 154 aaKnown RBP8.13□□□□□ -1.11
LEMD3-202ENST00000539442 LEMD1Q68G75 181 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 SUN5Q8TC36 379 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 MARC2Q969Z3 335 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 ZNF503Q96F45 646 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 GRAMD2BQ96HH9 432 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 RAX2Q96IS3 184 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 CITED1Q99966 193 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 PAXXQ9BUH6 204 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 TMEM231Q9H6L2 316 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 MANBALQ9NQG1 85 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 PEMTQ9UBM1 199 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 ARL2-SNX15V9GYD0 113 aa8.13□□□□□ -1.11
LEMD3-202ENST00000539442 TMEM213A2RRL7 107 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 MRPS12O15235 138 aaKnown RBP8.12□□□□□ -1.11
LEMD3-202ENST00000539442 ZNF207O43670 478 aaKnown RBP8.12□□□□□ -1.11
LEMD3-202ENST00000539442 SLURP1P55000 103 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 CCL20P78556 96 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 IQCF2Q8IXL9 164 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 OR8I2Q8N0Y5 310 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 OR4F17Q8NGA8 305 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 TMEM158Q8WZ71 300 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 OR4F4Q96R69 305 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 ELOVL1Q9BW60 279 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 GNG13Q9P2W3 67 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 SMPXQ9UHP9 88 aa8.12□□□□□ -1.11
LEMD3-202ENST00000539442 PYYP10082 97 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 HIST1H1EP10412 219 aaKnown RBP8.11□□□□□ -1.11
LEMD3-202ENST00000539442 GALR1P47211 349 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 MEOX2P50222 304 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 NSUN5P1Q3KNT7 163 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 TM4SF20Q53R12 229 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 HIST2H2BDQ6DRA6 164 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 C16orf54Q6UWD8 224 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 COMMD7Q86VX2 200 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 EIF4E3Q8N5X7 224 aaKnown RBP8.11□□□□□ -1.11
LEMD3-202ENST00000539442 OR9G4Q8NGQ1 327 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 GLMPQ8WWB7 406 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 DLX4Q92988 240 aaPredicted RBP8.11□□□□□ -1.11
LEMD3-202ENST00000539442 FXYD5Q96DB9 178 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 DUX3Q96PT4 197 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 TXNDC17Q9BRA2 123 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 TMPRSS5Q9H3S3 457 aa8.11□□□□□ -1.11
LEMD3-202ENST00000539442 SETD2Q9BYW2 2564 aaPredicted RBP8.11□□□□□ -1.11
LEMD3-202ENST00000539442 A0A087X0K7 114 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 RBFOX3A6NFN3 312 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 C2orf70A6NJV1 201 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 M0QZ24 198 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 CHEK1O14757 476 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 NDUFS6O75380 124 aaKnown RBP8.1□□□□□ -1.11
LEMD3-202ENST00000539442 APOHP02749 345 aaPredicted RBP8.1□□□□□ -1.11
LEMD3-202ENST00000539442 CD5P06127 495 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 OR10J4P0C629 311 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 IGLC2P0DOY2 106 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 BCL2P10415 239 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 PDE6HQ13956 83 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 GUK1Q16774 197 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 ZNF506Q5JVG8 444 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 UQCC3Q6UW78 93 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 ZNF747Q9BV97 191 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
LEMD3-202ENST00000539442 SMDT1Q9H4I9 107 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms