RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SLC25A21Q9BQT8 299 aaPredicted RBP8.88□□□□□ -0.99
VAMP1-206ENST00000538970 HERC1Q15751 4861 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 H3BP45 60 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 HOXB5P09067 269 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 HTN3P15516 51 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 ORM2P19652 201 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 AKR1C1Q04828 323 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 Q6ZR54 194 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 ACOT7LQ6ZUV0 252 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 DEDD2Q8WXF8 326 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 IGF2BP2-AS1Q96M15 143 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 GPR82Q96P67 336 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 RSG1Q9BU20 258 aa8.87□□□□□ -0.99
VAMP1-206ENST00000538970 TRAV8-2A0A0B4J237 113 aa8.86□□□□□ -0.99
VAMP1-206ENST00000538970 CNN1P51911 297 aaKnown RBP8.86□□□□□ -0.99
VAMP1-206ENST00000538970 RNF212Q495C1 297 aa8.86□□□□□ -0.99
VAMP1-206ENST00000538970 SPANXN5Q5MJ07 72 aa8.86□□□□□ -0.99
VAMP1-206ENST00000538970 TMEM88Q6PEY1 159 aa8.86□□□□□ -0.99
VAMP1-206ENST00000538970 TMEM208Q9BTX3 173 aa8.86□□□□□ -0.99
VAMP1-206ENST00000538970 TMEM147Q9BVK8 224 aa8.86□□□□□ -0.99
VAMP1-206ENST00000538970 H3BRN7 92 aa8.85□□□□□ -0.99
VAMP1-206ENST00000538970 CRXO43186 299 aaPredicted RBP8.85□□□□□ -0.99
VAMP1-206ENST00000538970 INSP01308 110 aa8.85□□□□□ -0.99
VAMP1-206ENST00000538970 S100A7P31151 101 aa8.85□□□□□ -0.99
VAMP1-206ENST00000538970 DAD1P61803 113 aa8.85□□□□□ -0.99
VAMP1-206ENST00000538970 SPINK13Q1W4C9 94 aa8.85□□□□□ -0.99
VAMP1-206ENST00000538970 IGFL4Q6B9Z1 124 aa8.85□□□□□ -0.99
VAMP1-206ENST00000538970 OR11H7Q8NGC8 314 aa8.85□□□□□ -0.99
VAMP1-206ENST00000538970 STRAPQ9Y3F4 350 aaKnown RBP8.85□□□□□ -0.99
VAMP1-206ENST00000538970 M0R2Z0 102 aa8.84□□□□□ -0.99
VAMP1-206ENST00000538970 ADAP1O75689 374 aa8.84□□□□□ -0.99
VAMP1-206ENST00000538970 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
VAMP1-206ENST00000538970 UBE2MP61081 183 aaKnown RBP8.84□□□□□ -0.99
VAMP1-206ENST00000538970 CYP2G1PQ6ZSU1 146 aa8.84□□□□□ -0.99
VAMP1-206ENST00000538970 TMEM144Q7Z5S9 345 aa8.84□□□□□ -0.99
VAMP1-206ENST00000538970 CCDC190Q86UF4 302 aa8.84□□□□□ -0.99
VAMP1-206ENST00000538970 RNF182Q8N6D2 247 aa8.84□□□□□ -0.99
VAMP1-206ENST00000538970 SHANK2-AS3Q9BTD1 123 aa8.84□□□□□ -0.99
VAMP1-206ENST00000538970 SLC25A39Q9BZJ4 359 aaPredicted RBP8.84□□□□□ -0.99
VAMP1-206ENST00000538970 HSPG2P98160 4391 aa8.84□□□□□ -0.99
VAMP1-206ENST00000538970 SMCO3A2RU48 225 aa8.83□□□□□ -1
VAMP1-206ENST00000538970 PMS2P5A8MQ11 134 aa8.83□□□□□ -1
VAMP1-206ENST00000538970 LYRM9A8MSI8 78 aa8.83□□□□□ -1
VAMP1-206ENST00000538970 ZNF705GA8MUZ8 300 aaPredicted RBP8.83□□□□□ -1
VAMP1-206ENST00000538970 PRM2P04554 102 aa8.83□□□□□ -1
VAMP1-206ENST00000538970 POLR2GP62487 172 aaKnown RBP eCLIP8.83□□□□□ -1
VAMP1-206ENST00000538970 ID3Q02535 119 aa8.83□□□□□ -1
VAMP1-206ENST00000538970 FGL1Q08830 312 aa8.83□□□□□ -1
VAMP1-206ENST00000538970 BAP18Q8IXM2 172 aa8.83□□□□□ -1
VAMP1-206ENST00000538970 PLAC8L1A1L4L8 177 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 C9orf170A2RU37 121 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 BOLA2-SMG1P6H3BVE0 249 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 IL5P05113 134 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 LINC00869P0C866 280 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 RPL7P18124 248 aaKnown RBP8.82□□□□□ -1
VAMP1-206ENST00000538970 TSPOP30536 169 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 S100A5P33763 92 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 PLP1P60201 277 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 RAP2BP61225 183 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 ZNF738Q8NE65 137 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 PSENENQ9NZ42 101 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 HIGD1AQ9Y241 93 aa8.82□□□□□ -1
VAMP1-206ENST00000538970 TRAV12-2A0A075B6T6 113 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 A0A087X0K7 114 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 SSSCA1O60232 199 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 HYPMO75409 117 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 CCNKO75909 580 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 CXCL3P19876 107 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 FAM3BP58499 235 aaPredicted RBP8.81□□□□□ -1
VAMP1-206ENST00000538970 B2MP61769 119 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 SELENOTP62341 195 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 SOHLH1Q5JUK2 328 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 UHRF2Q96PU4 802 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 SRRQ9GZT4 340 aa8.81□□□□□ -1
VAMP1-206ENST00000538970 K7EPK0 472 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 NDUFB6O95139 128 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 OR5G3P0C626 314 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 DEFB130BP0DP73 79 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 DEFB130AP0DP74 79 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 AZU1P20160 251 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 RRAS2P62070 204 aaPredicted RBP8.8□□□□□ -1
VAMP1-206ENST00000538970 DLK1P80370 383 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 HIST1H1AQ02539 215 aaPredicted RBP8.8□□□□□ -1
VAMP1-206ENST00000538970 C1orf134Q5TEV5 83 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 TMEM14EPQ6UXP3 125 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 OR8A1Q8NGG7 326 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 SMIM8Q96KF7 97 aa8.8□□□□□ -1
VAMP1-206ENST00000538970 NAP1L6A6NFF2 107 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 CCDC160A6NGH7 325 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 FNDC10F2Z333 226 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
VAMP1-206ENST00000538970 OR4E1P0C645 316 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 METTL15P1P0C7V9 234 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 SLC38A11Q08AI6 406 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 PSG3Q16557 428 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 SPANXN2Q5MJ10 180 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 PATE2Q6UY27 113 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 ZNF575Q86XF7 245 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms