RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SCRT1Q9BWW7 348 aa10.8□□□□□ -0.68
RAB40B-202ENST00000538809 HRH4Q9H3N8 390 aa10.8□□□□□ -0.68
RAB40B-202ENST00000538809 DNAH6Q9C0G6 4158 aa10.8□□□□□ -0.68
RAB40B-202ENST00000538809 VPS13DQ5THJ4 4388 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 IGLL5B9A064 214 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 LINC00869P0C866 280 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 GALR1P47211 349 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 SELENOTP62341 195 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 ZNF846Q147U1 533 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 C16orf92Q96LL3 132 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 CLUHP3Q96NS8 147 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 SHANK2-AS3Q9BTD1 123 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 RSG1Q9BU20 258 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 GGACTQ9BVM4 153 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 SLC25A39Q9BZJ4 359 aaPredicted RBP10.79□□□□□ -0.68
RAB40B-202ENST00000538809 SLC35B3Q9H1N7 401 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 FRAS1Q86XX4 4008 aa10.79□□□□□ -0.68
RAB40B-202ENST00000538809 IGHV3OR16-12A0A075B7B8 117 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 C5orf51A6NDU8 294 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 FAM25EA8MYX2 175 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 MEOX2P50222 304 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 SLC38A11Q08AI6 406 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 SAMD13Q5VXD3 122 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 LGALS9CQ6DKI2 356 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 TEPPQ6URK8 271 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 PATE2Q6UY27 113 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 ZNF709Q8N972 641 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 GPR82Q96P67 336 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 MGAT4CQ9UBM8 478 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 HIGD1AQ9Y241 93 aa10.78□□□□□ -0.68
RAB40B-202ENST00000538809 LSM5Q9Y4Y9 91 aaKnown RBP10.78□□□□□ -0.68
RAB40B-202ENST00000538809 A8MTW9 85 aa10.77□□□□□ -0.69
RAB40B-202ENST00000538809 C11orf94C9JXX5 98 aa10.77□□□□□ -0.69
RAB40B-202ENST00000538809 FAM78BQ5VT40 261 aa10.77□□□□□ -0.69
RAB40B-202ENST00000538809 IGFL4Q6B9Z1 124 aa10.77□□□□□ -0.69
RAB40B-202ENST00000538809 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.69
RAB40B-202ENST00000538809 RPRMQ9NS64 109 aa10.77□□□□□ -0.69
RAB40B-202ENST00000538809 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 TRAV10A0A0B4J240 114 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 A0A0J9YX75 114 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 FAM24AA6NFZ4 105 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 L7N2F9 121 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 AGPAT2O15120 278 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 MRPS12O15235 138 aaKnown RBP10.76□□□□□ -0.69
RAB40B-202ENST00000538809 HYPMO75409 117 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 S100A7P31151 101 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 VAMP2P63027 116 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 FGL1Q08830 312 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 RAB32Q13637 225 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 SPATA31B1PQ5VZV4 182 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 ZNF705AQ6ZN79 300 aaPredicted RBP10.76□□□□□ -0.69
RAB40B-202ENST00000538809 ENKURQ8TC29 256 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 UHRF2Q96PU4 802 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 MGST2Q99735 147 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 APLNQ9ULZ1 77 aa10.76□□□□□ -0.69
RAB40B-202ENST00000538809 A0A087X0K7 114 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 ZNF705FA8MVS1 300 aaPredicted RBP10.75□□□□□ -0.69
RAB40B-202ENST00000538809 OR5G3P0C626 314 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 ZNF705DP0CH99 300 aaPredicted RBP10.75□□□□□ -0.69
RAB40B-202ENST00000538809 ZNF705BP0CI00 300 aaPredicted RBP10.75□□□□□ -0.69
RAB40B-202ENST00000538809 EMP1P54849 157 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 RAP2BP61225 183 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 PRR20EP86478 221 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 PRR20CP86479 221 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 PRR20DP86480 221 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 PRR20BP86481 221 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 PRR20AP86496 221 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 PSG9Q00887 426 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 VWC2Q2TAL6 325 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 C12orf74Q32Q52 190 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 PXDC1Q5TGL8 231 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 NRARPQ7Z6K4 114 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 ZNF546Q86UE3 836 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 RNF182Q8N6D2 247 aa10.75□□□□□ -0.69
RAB40B-202ENST00000538809 LYRM2Q9NU23 88 aaPredicted RBP10.75□□□□□ -0.69
RAB40B-202ENST00000538809 IGHV4-4A0A075B6R2 117 aa10.74□□□□□ -0.69
RAB40B-202ENST00000538809 IGSF23A1L1A6 192 aa10.74□□□□□ -0.69
RAB40B-202ENST00000538809 CST7O76096 145 aa10.74□□□□□ -0.69
RAB40B-202ENST00000538809 RPL7P18124 248 aaKnown RBP10.74□□□□□ -0.69
RAB40B-202ENST00000538809 CAV2P51636 162 aa10.74□□□□□ -0.69
RAB40B-202ENST00000538809 ARL6Q9H0F7 186 aa10.74□□□□□ -0.69
RAB40B-202ENST00000538809 ARV1Q9H2C2 271 aa10.74□□□□□ -0.69
RAB40B-202ENST00000538809 DNAH10Q8IVF4 4471 aa10.74□□□□□ -0.69
RAB40B-202ENST00000538809 DEFB131BA0A096LNP1 70 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 PRB4P10163 310 aaPredicted RBP10.73□□□□□ -0.69
RAB40B-202ENST00000538809 SULT1A1P50225 295 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 BCAP31P51572 246 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 TCTAP57738 103 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 S100A10P60903 97 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 AMTNQ6UX39 209 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 TMEM252Q8N6L7 170 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 TMEM37Q8WXS4 190 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 NEU1Q99519 415 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 MARVELD1Q9BSK0 173 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 GPN1Q9HCN4 374 aaPredicted RBP10.73□□□□□ -0.69
RAB40B-202ENST00000538809 BATF3Q9NR55 127 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 WDR83OSQ9Y284 106 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 GOLT1BQ9Y3E0 138 aa10.73□□□□□ -0.69
RAB40B-202ENST00000538809 INMT-MINDY4F8WBC2 141 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms