RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 TRAV40A0A0B4J280 105 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 IGKV3D-20A0A0C4DH25 116 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 TRGV4A0A0C4DH28 118 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 F8WEM9 126 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 NDUFB8O95169 186 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 ZNF876PQ49A33 203 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 BMPERQ8N8U9 685 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 C11orf52Q96A22 123 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 RCHY1Q96PM5 261 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 TMEM14CQ9P0S9 112 aa5.66□□□□□ -1.5
SORT1-209ENST00000538502 IGHV3OR16-13A0A075B7E8 117 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 IGHV3-74A0A0B4J1X5 117 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 IGHV3-35A0A0C4DH35 117 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 NDUFC2O95298 119 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 SLC25A16P16260 332 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 COLCA1Q6ZS62 124 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 USMG5Q96IX5 58 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 PRO1854Q9UHT4 67 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 IGHV3-49A0A0A0MS15 119 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 C9JQL5 133 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 RNASE2P10153 161 aaKnown RBP5.65□□□□□ -1.5
SORT1-209ENST00000538502 PRSS22Q9GZN4 317 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 S4R3C0 116 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 ATG2BQ96BY7 2078 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 HLA-DRB4P13762 266 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 TFF2Q03403 129 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 CFHR1Q03591 330 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 AMN1Q8IY45 258 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 ANKRD29Q8N6D5 301 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 ZNF837Q96EG3 531 aaPredicted RBP5.65□□□□□ -1.5
SORT1-209ENST00000538502 HLA-DRB4X5D2U9 266 aa5.65□□□□□ -1.5
SORT1-209ENST00000538502 CHD5Q8TDI0 1954 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 IGHV3-64A0A075B6Q5 118 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 M0R1W7 72 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 IGLL1P15814 213 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 FOXL2P58012 376 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 ARID1AO14497 2285 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 TRIP12Q14669 1992 aaPredicted RBP5.65□□□□□ -1.51
SORT1-209ENST00000538502 A0A087WV48 116 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 PPIFP30405 207 aaKnown RBP5.65□□□□□ -1.51
SORT1-209ENST00000538502 TCF15Q12870 199 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 DPH3Q96FX2 82 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 PYGO2Q9BRQ0 406 aa5.65□□□□□ -1.51
SORT1-209ENST00000538502 IGHV2-70DA0A0C4DH43 119 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 SHISA9B4DS77 424 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 TRAV13-2A0A0B4J235 113 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 IGHV1-18A0A0C4DH31 117 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 CCL3L1P16619 93 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 ATP5J2P56134 94 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 DEFB125Q8N687 156 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 VGLL1Q99990 258 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 TRAV41A0A0B4J266 112 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 IGHV1-3A0A0C4DH29 117 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 H3BQ85 93 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 CELA3BP08861 270 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
SORT1-209ENST00000538502 BRCA1P38398 1863 aaKnown RBP5.64□□□□□ -1.51
SORT1-209ENST00000538502 ZSWIM8A7E2V4 1837 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 WNT2P09544 360 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 STPG4Q8N801 248 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 CKAP5Q14008 2032 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 PATE3B3GLJ2 98 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 RHODO00212 210 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 IGHV1-8P0DP01 117 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 SCN2AQ99250 2005 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 SS18Q15532 418 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 CHCHD5Q9BSY4 110 aa5.64□□□□□ -1.51
SORT1-209ENST00000538502 TIMM23O14925 209 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 GLMPQ8WWB7 406 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 I3L3M4 83 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 C20orf78Q9BR46 151 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 TMEM14BQ9NUH8 114 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 IGHV1-46P01743 117 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 RNASE6Q93091 150 aaKnown RBP5.63□□□□□ -1.51
SORT1-209ENST00000538502 NPYP01303 97 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 CELA3AP09093 270 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 ARMS2P0C7Q2 107 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 STPG1Q5TH74 334 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 FGF6P10767 208 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 RSPO4Q2I0M5 234 aaPredicted RBP5.63□□□□□ -1.51
SORT1-209ENST00000538502 FAM201AQ5SY85 155 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 PIKFYVEQ9Y2I7 2098 aa5.63□□□□□ -1.51
SORT1-209ENST00000538502 TMEM200BQ69YZ2 307 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 FAM168AQ92567 244 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 SPAARA0A1B0GVQ0 90 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 F8VRH5 84 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 CD33P20138 364 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 RPL15P61313 204 aaKnown RBP5.62□□□□□ -1.51
SORT1-209ENST00000538502 C1orf122Q6ZSJ8 110 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 LCTP09848 1927 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 A0A087WX48 190 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 DSCR9P59020 149 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 NPC2P61916 151 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 C12orf74Q32Q52 190 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 ETDBQ3ZM63 59 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 GGNQ86UU5 652 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 C9orf106Q8NAJ2 232 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 LINC00473A8K010 186 aa5.62□□□□□ -1.51
SORT1-209ENST00000538502 C3orf36Q3SXR2 165 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms