RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 HIST2H2BEQ16778 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 IZUMO4Q1ZYL8 232 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 ODF3L2Q3SX64 289 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 LBHQ53QV2 105 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-208ENST00000538266 NMSQ5H8A3 153 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 PYY3Q5JQD4 70 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM252Q8N6L7 170 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 OR10D4PQ8NGN7 298 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 OR5C1Q8NGR4 320 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BHQ93079 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 FAM210BQ96KR6 192 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 RAB40CQ96S21 281 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BNQ99877 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BMQ99879 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 PSMG3Q9BT73 122 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM242Q9NWH2 141 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TRBV24-1A0A075B6N3 115 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 A0A0G2JLM5 398 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 A0A0G2JRQ6 117 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 IGLC7A0M8Q6 106 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 FAM223BA6NKX1 122 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 TEX22C9J3V5 150 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 H3BUA1 57 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 M0QZ24 198 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 NDUFS6O75380 124 aaKnown RBP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 CST7O76096 145 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 REG1AP05451 166 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 CXCL1P09341 107 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 P0C879 139 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 RD3LP0DJH9 198 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 CD28P10747 220 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 FABP4P15090 132 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 AREGP15514 252 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 PSMB8P28062 276 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 GPX4P36969 197 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 SUB1P53999 127 aaKnown RBP eCLIP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 HSPE1P61604 102 aaKnown RBP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 RAB11AP62491 216 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 HBG1P69891 147 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 HBG2P69892 147 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 RHOGP84095 191 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 RUNX1Q01196 453 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 TNFRSF9Q07011 255 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 MRGPRG-AS1Q2M3A8 158 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM41BQ5BJD5 291 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 SPINK9Q5DT21 86 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF343Q6P1L6 599 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 NDUFA11Q86Y39 141 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 FAM223AQ8IWN6 122 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM183AQ8IXX5 376 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 NECAP1Q8NC96 275 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 OR5T1Q8NG75 326 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 OR10W1Q8NGF6 305 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 OR1L6Q8NGR2 347 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 OR52E5Q8NH55 327 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 SCGB1C1Q8TD33 95 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 GPR146Q96CH1 333 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 URB1-AS1Q96HZ7 61 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 PACRGQ96M98 296 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 MS4A10Q96PG2 267 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 CIB3Q96Q77 187 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 P2RX4Q99571 388 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 CITED2Q99967 270 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 PARD6GQ9BYG4 376 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 MAGT1Q9H0U3 335 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 NDUFA4L2Q9NRX3 87 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 THYN1Q9P016 225 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 GNG13Q9P2W3 67 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 HSPB7Q9UBY9 170 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 NAT8Q9UHE5 227 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 VAX2Q9UIW0 290 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 TSSC4Q9Y5U2 329 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-208ENST00000538266 URGCP-MRPS24S4R325 110 aa3.34□□□□□ -1.87
SNHG1-208ENST00000538266 MAP1LC3B2A6NCE7 125 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 ZFP92A6NM28 416 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 FAM90A26D6RGX4 464 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 E7EUB6 86 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 CORTO00230 105 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 SOX15O60248 233 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 SCGB2A1O75556 95 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 TOMM40O96008 361 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 TRGC2P03986 189 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 METTL15P1P0C7V9 234 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 TRGC1P0CF51 173 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 MYOD1P15172 320 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 RAB9AP51151 201 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 TAS2R60P59551 318 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 RPP30P78346 268 aaKnown RBP3.33□□□□□ -1.88
SNHG1-208ENST00000538266 ATP5G2Q06055 141 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 WT1-ASQ06250 92 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 GAMTQ14353 236 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 C15orf32Q32M92 178 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 NSUN5P1Q3KNT7 163 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 AARDQ4LEZ3 155 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 PDLIM3Q53GG5 364 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-208ENST00000538266 PDZD11Q5EBL8 140 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 C10orf99Q6UWK7 81 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 C9orf47Q6ZRZ4 202 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 CYP2G1PQ6ZSU1 146 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms