RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 ATP6V1FQ16864 119 aa10.85□□□□□ -0.67
LRRK1-211ENST00000538064 CYP2G1PQ6ZSU1 146 aa10.85□□□□□ -0.67
LRRK1-211ENST00000538064 VPS13DQ5THJ4 4388 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 IGSF23A1L1A6 192 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 ZNF705EA8MWA4 302 aaPredicted RBP10.84□□□□□ -0.67
LRRK1-211ENST00000538064 DEFB4AO15263 64 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 MPC2O95563 127 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 FCN2Q15485 313 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 PPP1R14BQ96C90 147 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 UQCC1Q9NVA1 299 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 OR5AC2Q9NZP5 309 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 FBXL17Q9UF56 701 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 SLC45A2Q9UMX9 530 aa10.84□□□□□ -0.67
LRRK1-211ENST00000538064 IGHV4-28A0A0C4DH34 117 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 H0YIZ8 118 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 MIFP14174 115 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 CXCL3P19876 107 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 BAXQ07812 192 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 S100A7AQ86SG5 101 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 ZNF546Q86UE3 836 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 ASB13Q8WXK3 278 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 TMEM147Q9BVK8 224 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 HRH4Q9H3N8 390 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 X6R8D5 127 aa10.83□□□□□ -0.68
LRRK1-211ENST00000538064 FRAS1Q86XX4 4008 aa10.82□□□□□ -0.68
LRRK1-211ENST00000538064 ORM2P19652 201 aa10.82□□□□□ -0.68
LRRK1-211ENST00000538064 GATA2P23769 480 aaPredicted RBP10.82□□□□□ -0.68
LRRK1-211ENST00000538064 CSNK1G2-AS1Q8NCQ2 148 aa10.82□□□□□ -0.68
LRRK1-211ENST00000538064 OR11H7Q8NGC8 314 aa10.82□□□□□ -0.68
LRRK1-211ENST00000538064 THAP6Q8TBB0 222 aa10.82□□□□□ -0.68
LRRK1-211ENST00000538064 RNF126Q9BV68 326 aa10.82□□□□□ -0.68
LRRK1-211ENST00000538064 AGPAT2O15120 278 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 HYPMO75409 117 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 LINC00869P0C866 280 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 RBMY1A1P0DJD3 496 aaKnown RBP10.81□□□□□ -0.68
LRRK1-211ENST00000538064 RBMY1CP0DJD4 496 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 HLA-DRB4P13762 266 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 RAP2BP61225 183 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 FGL1Q08830 312 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 RBMY1FQ15415 496 aaKnown RBP10.81□□□□□ -0.68
LRRK1-211ENST00000538064 VWC2Q2TAL6 325 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 C1orf194Q5T5A4 169 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 PXDC1Q5TGL8 231 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 TMEM182Q6ZP80 229 aaPredicted RBP10.81□□□□□ -0.68
LRRK1-211ENST00000538064 OR1B1Q8NGR6 318 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 C1QTNF4Q9BXJ3 329 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 CLEC5AQ9NY25 188 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 RNF24Q9Y225 148 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 HLA-DRB4X5D2U9 266 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 DNAH10Q8IVF4 4471 aa10.81□□□□□ -0.68
LRRK1-211ENST00000538064 H3BMM0 161 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 SOCS3O14543 225 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 GIPP09681 153 aaPredicted RBP10.8□□□□□ -0.68
LRRK1-211ENST00000538064 CAMLGP49069 296 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 PSMB3P49720 205 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 PLP1P60201 277 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
LRRK1-211ENST00000538064 NHLH2Q02577 135 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 LGALS9CQ6DKI2 356 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 OR5C1Q8NGR4 320 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 C2CD4CQ8TF44 421 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 MGST2Q99735 147 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 MBD2Q9UBB5 411 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 WDR83OSQ9Y284 106 aa10.8□□□□□ -0.68
LRRK1-211ENST00000538064 UBE2L5PA0A1B0GUS4 154 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 C11orf94C9JXX5 98 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 MPDU1O75352 247 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 OR5G3P0C626 314 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 RPL12P30050 165 aaKnown RBP10.79□□□□□ -0.68
LRRK1-211ENST00000538064 TCTAP57738 103 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 Q6ZRG5 221 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 OR8I2Q8N0Y5 310 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 DOK5Q9P104 306 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
LRRK1-211ENST00000538064 ELOA3CA0A087WX78 387 aaPredicted RBP10.78□□□□□ -0.68
LRRK1-211ENST00000538064 ZNF98A6NK75 572 aa10.78□□□□□ -0.68
LRRK1-211ENST00000538064 FGF7P21781 194 aa10.78□□□□□ -0.68
LRRK1-211ENST00000538064 ID1P41134 155 aa10.78□□□□□ -0.68
LRRK1-211ENST00000538064 GDF5OSQ5U4N7 250 aa10.78□□□□□ -0.68
LRRK1-211ENST00000538064 SAMD13Q5VXD3 122 aa10.78□□□□□ -0.68
LRRK1-211ENST00000538064 FOXI2Q6ZQN5 318 aa10.78□□□□□ -0.68
LRRK1-211ENST00000538064 ARL6Q9H0F7 186 aa10.78□□□□□ -0.68
LRRK1-211ENST00000538064 SAV1Q9H4B6 383 aaPredicted RBP10.78□□□□□ -0.68
LRRK1-211ENST00000538064 ISLRO14498 428 aa10.77□□□□□ -0.69
LRRK1-211ENST00000538064 GALR1P47211 349 aa10.77□□□□□ -0.69
LRRK1-211ENST00000538064 CLINT1Q14677 625 aa10.77□□□□□ -0.69
LRRK1-211ENST00000538064 CHAC2Q8WUX2 184 aa10.77□□□□□ -0.69
LRRK1-211ENST00000538064 GPR82Q96P67 336 aa10.77□□□□□ -0.69
LRRK1-211ENST00000538064 SLC25A39Q9BZJ4 359 aaPredicted RBP10.77□□□□□ -0.69
LRRK1-211ENST00000538064 SLC25A22Q9H936 323 aa10.77□□□□□ -0.69
LRRK1-211ENST00000538064 XCL2Q9UBD3 114 aa10.77□□□□□ -0.69
LRRK1-211ENST00000538064 HSPB11Q9Y547 144 aa10.77□□□□□ -0.69
LRRK1-211ENST00000538064 H3BRN7 92 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 COX7A2P2O60397 106 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 HLA-DMBP28068 263 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 RPL29P47914 159 aaKnown RBP10.76□□□□□ -0.69
LRRK1-211ENST00000538064 MEOX2P50222 304 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 OPCMLQ14982 345 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 ZNF705AQ6ZN79 300 aaPredicted RBP10.76□□□□□ -0.69
LRRK1-211ENST00000538064 Q6ZTC4 211 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms