RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FAM106CPP0CH98 169 aa4.71□□□□□ -1.65
CSMD1-215ENST00000537824 NPIPB13A6NJU9 1138 aa4.71□□□□□ -1.65
CSMD1-215ENST00000537824 MAGEA5P43359 124 aa4.71□□□□□ -1.65
CSMD1-215ENST00000537824 APOBEC4Q8WW27 367 aaKnown RBP4.71□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV2-26A0A0B4J1V2 119 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 LYL1P12980 280 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 LINC00158P58513 81 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 THSD7AQ9UPZ6 1657 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 MAST4O15021 2626 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 MRPL23Q16540 153 aaKnown RBP4.71□□□□□ -1.66
CSMD1-215ENST00000537824 FAM89BQ8N5H3 189 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM158Q8WZ71 300 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 C12orf77C9JDV5 145 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 CSRP3P50461 194 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 SNRPD3P62318 126 aaKnown RBP4.71□□□□□ -1.66
CSMD1-215ENST00000537824 ID3Q02535 119 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 PLAURQ03405 335 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 PHF7Q9BWX1 381 aaPredicted RBP4.71□□□□□ -1.66
CSMD1-215ENST00000537824 F2Z2F3 143 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 TEX48A0A1B0GUV7 120 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 WNT2P09544 360 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 EXOC3-AS1Q8N2X6 119 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 H3BMG7 143 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 PFN1P07737 140 aaKnown RBP4.71□□□□□ -1.66
CSMD1-215ENST00000537824 CELA2AP08217 269 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 IGHV2OR16-5A0A0B4J2B6 119 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 PRB3Q04118 309 aaPredicted RBP4.71□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM196Q5HYL7 178 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM42Q69YG0 159 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 CT55Q8WUE5 264 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 KIR2DL5BA0A0G2JN68 375 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 KIR2DL5BA0A0G2JPC4 375 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 PAX4O43316 350 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 CCL8P80075 99 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 KIR2DL5AQ8N109 375 aa4.71□□□□□ -1.66
CSMD1-215ENST00000537824 RPP25LQ8N5L8 163 aaKnown RBP4.71□□□□□ -1.66
CSMD1-215ENST00000537824 KLF2Q9Y5W3 355 aaPredicted RBP4.71□□□□□ -1.66
CSMD1-215ENST00000537824 LEPROTO15243 131 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 INAFM2P0DMQ5 153 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 APOBEC3AP31941 199 aaPredicted RBP4.7□□□□□ -1.66
CSMD1-215ENST00000537824 AMTNQ6UX39 209 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 ANKRD29Q8N6D5 301 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 EEF1AKMT3Q96AZ1 226 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 FNDC10F2Z333 226 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 IGKV2-40A0A087WW87 121 aaPredicted RBP4.7□□□□□ -1.66
CSMD1-215ENST00000537824 IGKV2D-40P01614 121 aaPredicted RBP4.7□□□□□ -1.66
CSMD1-215ENST00000537824 IGHG4P01861 327 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 IGLL1P15814 213 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 PPP1R27Q86WC6 154 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 PRSS29PA6NIE9 313 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 RNF115Q9Y4L5 304 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 LTBP4Q8N2S1 1624 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 ACP7Q6ZNF0 438 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 ZNF784Q8NCA9 323 aaPredicted RBP4.7□□□□□ -1.66
CSMD1-215ENST00000537824 C18orf32Q8TCD1 76 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 LINC01549A6NIU2 74 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 GFRA3O60609 400 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 PAX1P15863 534 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 CRYBA4P53673 196 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 AMN1Q8IY45 258 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM86BQ8N661 226 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 TCRBV4S1A1TA0A5B7 111 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 VWC2LB2RUY7 222 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 CCL1P22362 96 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 SPEM2Q0P670 501 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 ZNF474Q6S9Z5 364 aaPredicted RBP4.7□□□□□ -1.66
CSMD1-215ENST00000537824 SRXN1Q9BYN0 137 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 TRAV12-1A0A0B4J245 112 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 IFNL4K9M1U5 179 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 CD69Q07108 199 aa4.7□□□□□ -1.66
CSMD1-215ENST00000537824 SH2D6Q7Z4S9 175 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 C21orf62Q9NYP8 219 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 A0A1W2PR77 199 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 OR13A1Q8NGR1 328 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 DUX3Q96PT4 197 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 JPT1Q9UK76 154 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 LY96Q9Y6Y9 160 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM30BQ3MIR4 351 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 ATRQ13535 2644 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 FAM106AQ4KMX7 169 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 DUX5Q96PT3 197 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 FABP5P3A8MUU1 101 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 LYZL1Q6UWQ5 148 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 DEFB104AQ8WTQ1 72 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 JPT2Q9H910 190 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 SYNJ2BPP57105 145 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 TIMM21Q9BVV7 248 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 FOXS1O43638 330 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 POU2AF1Q16633 256 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 NPIPB5A8MRT5 1133 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 NDUFC2O95298 119 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 NPPCP23582 126 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 CFHR2P36980 270 aa4.69□□□□□ -1.66
CSMD1-215ENST00000537824 COL9A1P20849 921 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 RHOGP84095 191 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 PPP1R32Q7Z5V6 425 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 CEND1Q8N111 149 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 DRD3P35462 400 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 SLC25A39Q9BZJ4 359 aaPredicted RBP4.68□□□□□ -1.66
CSMD1-215ENST00000537824 MGAM2Q2M2H8 2515 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms