RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CCL20P78556 96 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 BTN1A1Q13410 526 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 DPPA3Q6W0C5 159 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 C12orf54Q6X4T0 127 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 ADAMTSL5Q6ZMM2 481 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 SFT2D1Q8WV19 159 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 NARS2Q96I59 477 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 MDFIQ99750 246 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 ZNF747Q9BV97 191 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 TMPRSS5Q9H3S3 457 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 DAZ1Q9NQZ3 744 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 STAB1Q9NY15 2570 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 MAP1LC3B2A6NCE7 125 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 LGALS9O00182 355 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 H2AFB1P0C5Y9 115 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 ARL14EPLP0DKL9 152 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 PYYP10082 97 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 C3orf56Q8N813 242 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 MRPL32Q9BYC8 188 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 NKX6-2Q9C056 277 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 MAP1LC3BQ9GZQ8 125 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 U3KQE9 123 aa11.9□□□□□ -0.5
SFSWAP-206ENST00000537582 WNK1Q9H4A3 2382 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 IGHV7-4-1A0A0J9YVY3 117 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 A8MWP6 167 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 STAG3L2P0CL84 134 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 STAG3L3P0CL85 134 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 C8orf88P0DMB2 117 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 ADCYAP1P18509 176 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 ATRAIDQ6UW56 229 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 SVBPQ8N300 66 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 MBD3L1Q8WWY6 194 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 SEC11CQ9BY50 192 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 HRH4Q9H3N8 390 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 UFC1Q9Y3C8 167 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 VWFP04275 2813 aa11.89□□□□□ -0.51
SFSWAP-206ENST00000537582 C2orf70A6NJV1 201 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 H3BTX0 84 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 DNASE2O00115 360 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 BUB3O43684 328 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 OR10J4P0C629 311 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 MYCNOSP40205 109 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 OR9G4Q8NGQ1 327 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 TECRQ9NZ01 308 aaKnown RBP11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 SMPXQ9UHP9 88 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 K7EMT4 169 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 OR7C2O60412 319 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 GP9P14770 177 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 IQCF2Q8IXL9 164 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 RNF2Q99496 336 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 RHPN1-AS1Q9BWJ2 59 aa11.88□□□□□ -0.51
SFSWAP-206ENST00000537582 CHEK1O14757 476 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 MRPS12O15235 138 aaKnown RBP11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 PF4P02776 101 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 CD5P06127 495 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 CSN3P07498 182 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 FOLR2P14207 255 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 CBLN1P23435 193 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 C17orf77Q96MU5 243 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 TREM1Q9NP99 234 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 SMAD5-AS1Q9Y6J3 95 aa11.87□□□□□ -0.51
SFSWAP-206ENST00000537582 F8W036 122 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 H3BQ15 152 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 OVOL1O14753 267 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 GCHFRP30047 84 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 KHDC3LQ587J8 217 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 C16orf54Q6UWD8 224 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 OR8I2Q8N0Y5 310 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 GLMPQ8WWB7 406 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 FXYD5Q96DB9 178 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 ELOVL1Q9BW60 279 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 MLXQ9UH92 298 aa11.86□□□□□ -0.51
SFSWAP-206ENST00000537582 TAS2R45P59539 299 aa11.85□□□□□ -0.51
SFSWAP-206ENST00000537582 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
SFSWAP-206ENST00000537582 IGKV3-7A0A075B6H7 116 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 TRAV1-1A0A0B4J248 108 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 TSPAN4O14817 238 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 SNAPINO95295 136 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 CXorf1O96002 111 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 UBE2L3P68036 154 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 SHISA2Q6UWI4 295 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 OR4F17Q8NGA8 305 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 OR4F4Q96R69 305 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 ZNF586Q9NXT0 402 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 PEMTQ9UBM1 199 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 IGLC2P0DOY2 106 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 GUCA2BQ16661 112 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 BPIFA4PQ86YQ2 179 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 BLNKQ8WV28 456 aa11.84□□□□□ -0.51
SFSWAP-206ENST00000537582 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
SFSWAP-206ENST00000537582 PRB4P10163 310 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-206ENST00000537582 UBE2G2P60604 165 aa11.83□□□□□ -0.52
SFSWAP-206ENST00000537582 FAM74A3Q4VXF1 159 aa11.83□□□□□ -0.52
SFSWAP-206ENST00000537582 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
SFSWAP-206ENST00000537582 PQLC2Q6ZP29 291 aa11.83□□□□□ -0.52
SFSWAP-206ENST00000537582 TMEM231Q9H6L2 316 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms