RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 TMED3Q9Y3Q3 217 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 V9GYH0 126 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 KIAA1109Q2LD37 5005 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 ZNF705GA8MUZ8 300 aaPredicted RBP5.98□□□□□ -1.45
USP28-203ENST00000537490 H3BP45 60 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 NOL3O60936 208 aaKnown RBP5.98□□□□□ -1.45
USP28-203ENST00000537490 CNN1P51911 297 aaKnown RBP5.98□□□□□ -1.45
USP28-203ENST00000537490 AP3S2P59780 193 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 DAD1P61803 113 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 RPP30P78346 268 aaKnown RBP5.98□□□□□ -1.45
USP28-203ENST00000537490 ID3Q02535 119 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 SPINK13Q1W4C9 94 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 SAMD13Q5VXD3 122 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 TMEM88Q6PEY1 159 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 ACOT7LQ6ZUV0 252 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 RNF182Q8N6D2 247 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 BPIFCQ8NFQ6 507 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 OR11H7Q8NGC8 314 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 OR4D5Q8NGN0 318 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 OR1B1Q8NGR6 318 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 SLC25A21Q9BQT8 299 aaPredicted RBP5.98□□□□□ -1.45
USP28-203ENST00000537490 TMEM147Q9BVK8 224 aa5.98□□□□□ -1.45
USP28-203ENST00000537490 STRAPQ9Y3F4 350 aaKnown RBP5.98□□□□□ -1.45
USP28-203ENST00000537490 PMS2P5A8MQ11 134 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 H3BRN7 92 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 M0R2Z0 102 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 ADAP1O75689 374 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 CCNKO75909 580 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 DUSP14O95147 198 aaKnown RBP5.97□□□□□ -1.45
USP28-203ENST00000537490 MED14OSP0DP75 135 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 PRB4P10163 310 aaPredicted RBP5.97□□□□□ -1.45
USP28-203ENST00000537490 POLR2GP62487 172 aaKnown RBP eCLIP5.97□□□□□ -1.45
USP28-203ENST00000537490 AKR1C1Q04828 323 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 FGL1Q08830 312 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 RNF212Q495C1 297 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 CYP2G1PQ6ZSU1 146 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 TMEM144Q7Z5S9 345 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 GPR82Q96P67 336 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 SHANK2-AS3Q9BTD1 123 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 TMEM208Q9BTX3 173 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 SLC25A39Q9BZJ4 359 aaPredicted RBP5.97□□□□□ -1.45
USP28-203ENST00000537490 FAT2Q9NYQ8 4349 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 DNAH17Q9UFH2 4485 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
USP28-203ENST00000537490 DNAH2Q9P225 4427 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 TRAV12-2A0A075B6T6 113 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 C9orf170A2RU37 121 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 SMCO3A2RU48 225 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 IL5P05113 134 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 AZU1P20160 251 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 FCN2Q15485 313 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 CCDC190Q86UF4 302 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 BAP18Q8IXM2 172 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 LINC00528Q8N1L1 170 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 PSENENQ9NZ42 101 aa5.96□□□□□ -1.46
USP28-203ENST00000537490 DNAH11Q96DT5 4516 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 PLAC8L1A1L4L8 177 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 LYRM9A8MSI8 78 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 HYPMO75409 117 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 INSP01308 110 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 OR5G3P0C626 314 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 DEFB130BP0DP73 79 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 DEFB130AP0DP74 79 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 CXCL3P19876 107 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 S100A7P31151 101 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 S100A5P33763 92 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 PLP1P60201 277 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 RAP2BP61225 183 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 RRAS2P62070 204 aaPredicted RBP5.95□□□□□ -1.46
USP28-203ENST00000537490 C1orf134Q5TEV5 83 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 PATE2Q6UY27 113 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 ZNF575Q86XF7 245 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 ZNF738Q8NE65 137 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 OR8A1Q8NGG7 326 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 DEDD2Q8WXF8 326 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 UHRF2Q96PU4 802 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 FLVCR2Q9UPI3 526 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 HIGD1AQ9Y241 93 aa5.95□□□□□ -1.46
USP28-203ENST00000537490 BOLA2-SMG1P6H3BVE0 249 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 MRPS12O15235 138 aaKnown RBP5.94□□□□□ -1.46
USP28-203ENST00000537490 SSSCA1O60232 199 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 NDUFB6O95139 128 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 METTL15P1P0C7V9 234 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 LINC00869P0C866 280 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 RPL7P18124 248 aaKnown RBP5.94□□□□□ -1.46
USP28-203ENST00000537490 TSPOP30536 169 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 UBE2MP61081 183 aaKnown RBP5.94□□□□□ -1.46
USP28-203ENST00000537490 B2MP61769 119 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 RHOBP62745 196 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 DLK1P80370 383 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 HIST1H1AQ02539 215 aaPredicted RBP5.94□□□□□ -1.46
USP28-203ENST00000537490 PSG3Q16557 428 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 BAK1Q16611 211 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 TMEM14EPQ6UXP3 125 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 C15orf53Q8NAA6 179 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 SMIM8Q96KF7 97 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 LINC01587Q99440 93 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 SRRQ9GZT4 340 aa5.94□□□□□ -1.46
USP28-203ENST00000537490 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
USP28-203ENST00000537490 A0A087X0K7 114 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms