RNA–Protein interactions for RNA: ENST00000536613.6

CACNB1-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-205ENST00000536613 NEU1Q99519 415 aa13.22□□□□□ -0.29
CACNB1-205ENST00000536613 SHANK2-AS3Q9BTD1 123 aa13.22□□□□□ -0.29
CACNB1-205ENST00000536613 CCDC32Q9BV29 185 aa13.22□□□□□ -0.29
CACNB1-205ENST00000536613 NPVFQ9HCQ7 196 aa13.22□□□□□ -0.29
CACNB1-205ENST00000536613 MGAT4CQ9UBM8 478 aa13.22□□□□□ -0.29
CACNB1-205ENST00000536613 CELA1Q9UNI1 258 aa13.22□□□□□ -0.29
CACNB1-205ENST00000536613 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
CACNB1-205ENST00000536613 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 C7orf66A4D0T2 115 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 IGLL5B9A064 214 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 K7EPK0 472 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 CCSO14618 274 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 PLP1P60201 277 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 ZNF846Q147U1 533 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 RPP25LQ8N5L8 163 aaKnown RBP13.21□□□□□ -0.29
CACNB1-205ENST00000536613 SLC35B3Q9H1N7 401 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 NUDT15Q9NV35 164 aa13.21□□□□□ -0.29
CACNB1-205ENST00000536613 DEDDO75618 318 aa13.2□□□□□ -0.3
CACNB1-205ENST00000536613 C12orf74Q32Q52 190 aa13.2□□□□□ -0.3
CACNB1-205ENST00000536613 TEPPQ6URK8 271 aa13.2□□□□□ -0.3
CACNB1-205ENST00000536613 ZNF431Q8TF32 576 aaPredicted RBP13.2□□□□□ -0.3
CACNB1-205ENST00000536613 APLNQ9ULZ1 77 aa13.2□□□□□ -0.3
CACNB1-205ENST00000536613 KMT2AQ03164 3969 aa13.2□□□□□ -0.3
CACNB1-205ENST00000536613 BIRC6Q9NR09 4857 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 SMIM9A6NGZ8 99 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 FAM25EA8MYX2 175 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 OR5G3P0C626 314 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 RPL7P18124 248 aaKnown RBP13.19□□□□□ -0.3
CACNB1-205ENST00000536613 SLC38A11Q08AI6 406 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 ARL16Q0P5N6 197 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 LINC00299Q6ZSB3 139 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 UHRF2Q96PU4 802 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 SEC22CQ9BRL7 303 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 GGACTQ9BVM4 153 aa13.19□□□□□ -0.3
CACNB1-205ENST00000536613 TMEM189A5PLL7 270 aa13.18□□□□□ -0.3
CACNB1-205ENST00000536613 A8MTW9 85 aa13.18□□□□□ -0.3
CACNB1-205ENST00000536613 ZNF767PQ75MW2 155 aa13.18□□□□□ -0.3
CACNB1-205ENST00000536613 S100A7AQ86SG5 101 aa13.18□□□□□ -0.3
CACNB1-205ENST00000536613 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
CACNB1-205ENST00000536613 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
CACNB1-205ENST00000536613 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
CACNB1-205ENST00000536613 L7N2F9 121 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 H2AFB2P0C5Z0 115 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 VAMP2P63027 116 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 FGL1Q08830 312 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 AMTNQ6UX39 209 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 PATE2Q6UY27 113 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 C12orf45Q8N5I9 185 aaPredicted RBP13.17□□□□□ -0.3
CACNB1-205ENST00000536613 RNF182Q8N6D2 247 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 RFNGQ9Y644 331 aa13.17□□□□□ -0.3
CACNB1-205ENST00000536613 VPS13DQ5THJ4 4388 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 DEFB131BA0A096LNP1 70 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 C5orf51A6NDU8 294 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 AGPAT2O15120 278 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 EMP1P54849 157 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 PXDC1Q5TGL8 231 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 C1orf158Q8N1D5 194 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 RNF126Q9BV68 326 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 ARV1Q9H2C2 271 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 RNF24Q9Y225 148 aa13.16□□□□□ -0.3
CACNB1-205ENST00000536613 LSM5Q9Y4Y9 91 aaKnown RBP13.16□□□□□ -0.3
CACNB1-205ENST00000536613 A0A087X0K7 114 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 FAM240BA0A1B0GVZ2 78 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 GOSR2O14653 212 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
CACNB1-205ENST00000536613 SPART-AS1P0CW21 52 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 CAV2P51636 162 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 CNN1P51911 297 aaKnown RBP13.15□□□□□ -0.3
CACNB1-205ENST00000536613 PRR20EP86478 221 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 PRR20CP86479 221 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 PRR20DP86480 221 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 PRR20BP86481 221 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 PRR20AP86496 221 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 C2orf50Q96LR7 162 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 C11orf1Q9H5F2 150 aa13.15□□□□□ -0.3
CACNB1-205ENST00000536613 HBE1P02100 147 aa13.14□□□□□ -0.31
CACNB1-205ENST00000536613 AMBPP02760 352 aa13.14□□□□□ -0.31
CACNB1-205ENST00000536613 BCAP31P51572 246 aa13.14□□□□□ -0.31
CACNB1-205ENST00000536613 ZNF738Q8NE65 137 aa13.14□□□□□ -0.31
CACNB1-205ENST00000536613 S100ZQ8WXG8 99 aa13.14□□□□□ -0.31
CACNB1-205ENST00000536613 IGF2BP2-AS1Q96M15 143 aa13.14□□□□□ -0.31
CACNB1-205ENST00000536613 MGST2Q99735 147 aa13.14□□□□□ -0.31
CACNB1-205ENST00000536613 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
CACNB1-205ENST00000536613 CXCL3P19876 107 aa13.13□□□□□ -0.31
CACNB1-205ENST00000536613 ASAH1Q13510 395 aa13.13□□□□□ -0.31
CACNB1-205ENST00000536613 MZT2BQ6NZ67 158 aa13.13□□□□□ -0.31
CACNB1-205ENST00000536613 LINC00305Q7Z4B0 112 aa13.13□□□□□ -0.31
CACNB1-205ENST00000536613 OR11H7Q8NGC8 314 aa13.13□□□□□ -0.31
CACNB1-205ENST00000536613 DKK2Q9UBU2 259 aa13.13□□□□□ -0.31
CACNB1-205ENST00000536613 FRAS1Q86XX4 4008 aa13.12□□□□□ -0.31
CACNB1-205ENST00000536613 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
CACNB1-205ENST00000536613 LOC102723971A0A1B0GUV8 181 aa13.12□□□□□ -0.31
CACNB1-205ENST00000536613 COX7A2P2O60397 106 aa13.12□□□□□ -0.31
CACNB1-205ENST00000536613 CST7O76096 145 aa13.12□□□□□ -0.31
CACNB1-205ENST00000536613 PVALBP20472 110 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms