RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TMEM217Q8N7C4 229 aa10.35□□□□□ -0.75
UBE3B-206ENST00000536398 Q8NAQ8 132 aa10.35□□□□□ -0.75
UBE3B-206ENST00000536398 C16orf92Q96LL3 132 aa10.35□□□□□ -0.75
UBE3B-206ENST00000536398 MGST2Q99735 147 aa10.35□□□□□ -0.75
UBE3B-206ENST00000536398 GGACTQ9BVM4 153 aa10.35□□□□□ -0.75
UBE3B-206ENST00000536398 ARL6Q9H0F7 186 aa10.35□□□□□ -0.75
UBE3B-206ENST00000536398 SAV1Q9H4B6 383 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-206ENST00000536398 X6R8D5 127 aa10.35□□□□□ -0.75
UBE3B-206ENST00000536398 TRAV8-2A0A0B4J237 113 aa10.34□□□□□ -0.75
UBE3B-206ENST00000536398 IGHV4-28A0A0C4DH34 117 aa10.34□□□□□ -0.75
UBE3B-206ENST00000536398 INMT-MINDY4F8WBC2 141 aa10.34□□□□□ -0.75
UBE3B-206ENST00000536398 ISLRO14498 428 aa10.34□□□□□ -0.75
UBE3B-206ENST00000536398 ATF4P18848 351 aaPredicted RBP10.34□□□□□ -0.75
UBE3B-206ENST00000536398 SELENOTP62341 195 aa10.34□□□□□ -0.75
UBE3B-206ENST00000536398 CEMP1Q6PRD7 247 aaPredicted RBP10.34□□□□□ -0.75
UBE3B-206ENST00000536398 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
UBE3B-206ENST00000536398 BATF3Q9NR55 127 aa10.34□□□□□ -0.75
UBE3B-206ENST00000536398 ZNF705EA8MWA4 302 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-206ENST00000536398 GOSR2O14653 212 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 PRB4P10163 310 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-206ENST00000536398 RAP2BP61225 183 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 FGL1Q08830 312 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 TMEM41BQ5BJD5 291 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 FOXI2Q6ZQN5 318 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 RNF182Q8N6D2 247 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 TMEM252Q8N6L7 170 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 OR4B1Q8NGF8 309 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
UBE3B-206ENST00000536398 GPN1Q9HCN4 374 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-206ENST00000536398 ELOA3CA0A087WX78 387 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-206ENST00000536398 SNRPCP09234 159 aaKnown RBP10.32□□□□□ -0.76
UBE3B-206ENST00000536398 HLA-DMBP28068 263 aa10.32□□□□□ -0.76
UBE3B-206ENST00000536398 FAM78BQ5VT40 261 aa10.32□□□□□ -0.76
UBE3B-206ENST00000536398 MORN5Q5VZ52 161 aa10.32□□□□□ -0.76
UBE3B-206ENST00000536398 ZNF709Q8N972 641 aa10.32□□□□□ -0.76
UBE3B-206ENST00000536398 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-206ENST00000536398 TMEM37Q8WXS4 190 aa10.32□□□□□ -0.76
UBE3B-206ENST00000536398 MARVELD1Q9BSK0 173 aa10.32□□□□□ -0.76
UBE3B-206ENST00000536398 SLC35B3Q9H1N7 401 aa10.32□□□□□ -0.76
UBE3B-206ENST00000536398 ARV1Q9H2C2 271 aa10.32□□□□□ -0.76
UBE3B-206ENST00000536398 LYRM2Q9NU23 88 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-206ENST00000536398 A0A0J9YX75 114 aa10.31□□□□□ -0.76
UBE3B-206ENST00000536398 MRPS12O15235 138 aaKnown RBP10.31□□□□□ -0.76
UBE3B-206ENST00000536398 ZNF705DP0CH99 300 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-206ENST00000536398 ZNF705BP0CI00 300 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-206ENST00000536398 PVALBP20472 110 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-206ENST00000536398 MEOX2P50222 304 aa10.31□□□□□ -0.76
UBE3B-206ENST00000536398 SULT1A1P50225 295 aa10.31□□□□□ -0.76
UBE3B-206ENST00000536398 NUTF2P61970 127 aaKnown RBP10.31□□□□□ -0.76
UBE3B-206ENST00000536398 ZNF546Q86UE3 836 aa10.31□□□□□ -0.76
UBE3B-206ENST00000536398 GPR82Q96P67 336 aa10.31□□□□□ -0.76
UBE3B-206ENST00000536398 RPRMQ9NS64 109 aa10.31□□□□□ -0.76
UBE3B-206ENST00000536398 WDR83OSQ9Y284 106 aa10.31□□□□□ -0.76
UBE3B-206ENST00000536398 NUPR2A6NF83 97 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 H0YIZ8 118 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 JTBO76095 146 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 MIFP14174 115 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 RPL7P18124 248 aaKnown RBP10.3□□□□□ -0.76
UBE3B-206ENST00000536398 S100A7P31151 101 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 CAMLGP49069 296 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 H2BFSP57053 126 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 VWC2Q2TAL6 325 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 LRRC37A5PQ49AS3 106 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 MIC13Q5XKP0 118 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 UQCC1Q9NVA1 299 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 OR5AC2Q9NZP5 309 aa10.3□□□□□ -0.76
UBE3B-206ENST00000536398 TRAV5A0A0B4J249 113 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 UBE2L5PA0A1B0GUS4 154 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 COX7A2P2O60397 106 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 PRAF2O60831 178 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 S100A11P31949 105 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 PRR20EP86478 221 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 PRR20CP86479 221 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 PRR20DP86480 221 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 PRR20BP86481 221 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 PRR20AP86496 221 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 PSG9Q00887 426 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 NHLH2Q02577 135 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 CLUHP3Q96NS8 147 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 C1QTNF4Q9BXJ3 329 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 CELA1Q9UNI1 258 aa10.29□□□□□ -0.76
UBE3B-206ENST00000536398 KMT2AQ03164 3969 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 IGHV3OR16-12A0A075B7B8 117 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 A0A087X0K7 114 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 H3BTX0 84 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 DEFA1P59665 94 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 DEFA3P59666 94 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 BAXQ07812 192 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 OPCMLQ14982 345 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 PXDC1Q5TGL8 231 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 ZNF705AQ6ZN79 300 aaPredicted RBP10.28□□□□□ -0.76
UBE3B-206ENST00000536398 ZNF767PQ75MW2 155 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 STX12Q86Y82 276 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 NMES1Q9C002 83 aa10.28□□□□□ -0.76
UBE3B-206ENST00000536398 EPPK1P58107 5090 aaKnown RBP10.27□□□□□ -0.76
UBE3B-206ENST00000536398 A8MTW9 85 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms