RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 TMEM231Q9H6L2 316 aa5□□□□□ -1.61
CDCA3-205ENST00000535871 DAZ1Q9NQZ3 744 aaKnown RBP5□□□□□ -1.61
CDCA3-205ENST00000535871 RABAC1Q9UI14 185 aa5□□□□□ -1.61
CDCA3-205ENST00000535871 LINC00527Q9UJ94 153 aa5□□□□□ -1.61
CDCA3-205ENST00000535871 UFC1Q9Y3C8 167 aa5□□□□□ -1.61
CDCA3-205ENST00000535871 PUS1Q9Y606 427 aaKnown RBP eCLIP5□□□□□ -1.61
CDCA3-205ENST00000535871 TEP1Q99973 2627 aaKnown RBP4.99□□□□□ -1.61
CDCA3-205ENST00000535871 A0A1W2PRE2 83 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 MAP1LC3B2A6NCE7 125 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 H3BRN7 92 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 HMGB3O15347 200 aaKnown RBP4.99□□□□□ -1.61
CDCA3-205ENST00000535871 BUB3O43684 328 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 HIST1H1EP10412 219 aaKnown RBP4.99□□□□□ -1.61
CDCA3-205ENST00000535871 BTF3P20290 206 aaKnown RBP4.99□□□□□ -1.61
CDCA3-205ENST00000535871 NPPCP23582 126 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 KLF5Q13887 457 aaPredicted RBP4.99□□□□□ -1.61
CDCA3-205ENST00000535871 ZNF726P1Q15940 193 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 RPEL1Q2QD12 228 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 PATE2Q6UY27 113 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 NDUFA11Q86Y39 141 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 C1QL4Q86Z23 238 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 OR1B1Q8NGR6 318 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 GRAMD2BQ96HH9 432 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 FAM167A-AS1Q96KT0 104 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 FAM210AQ96ND0 272 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 MAP1LC3BQ9GZQ8 125 aa4.99□□□□□ -1.61
CDCA3-205ENST00000535871 A0A087X0K7 114 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 TRAV2A0A0B4J234 112 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 LOC102723971A0A1B0GUV8 181 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 HELTA6NFD8 242 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 FBLL1A6NHQ2 334 aaKnown RBP4.98□□□□□ -1.61
CDCA3-205ENST00000535871 PRSS29PA6NIE9 313 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 ZNF98A6NK75 572 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 LINC01619G3V211 115 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 TMEM250H0YL14 139 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 PDE6DO43924 150 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 IGHV3-48P01763 117 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 ORM2P19652 201 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 GCHFRP30047 84 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 LYZP61626 148 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 PEA15Q15121 130 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 USF2Q15853 346 aaPredicted RBP4.98□□□□□ -1.61
CDCA3-205ENST00000535871 TCTEX1D4Q5JR98 221 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 ZNF506Q5JVG8 444 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 FAM122CQ6P4D5 195 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 CCDC28AQ8IWP9 274 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 RPUSD4Q96CM3 377 aaKnown RBP4.98□□□□□ -1.61
CDCA3-205ENST00000535871 ZNF414Q96IQ9 312 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 OR51M1Q9H341 326 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 HRH4Q9H3N8 390 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 VSIRQ9H7M9 311 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 PEMTQ9UBM1 199 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 VAX2Q9UIW0 290 aa4.98□□□□□ -1.61
CDCA3-205ENST00000535871 IGHV3-21A0A0B4J1V1 117 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 SERTM2A0A1B0GWG4 89 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 RBFOX3A6NFN3 312 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 CYSRT1A8MQ03 144 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 KRBOX1C9JBD0 128 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 MRPS12O15235 138 aaKnown RBP4.97□□□□□ -1.61
CDCA3-205ENST00000535871 ARL14EPLP0DKL9 152 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 IGLC2P0DOY2 106 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 BCL2P10415 239 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 GP9P14770 177 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 GATA2P23769 480 aaPredicted RBP4.97□□□□□ -1.61
CDCA3-205ENST00000535871 MYCNOSP40205 109 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 GALR1P47211 349 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 GCSAMLQ5JQS6 135 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 Q71RC1 249 aaPredicted RBP4.97□□□□□ -1.61
CDCA3-205ENST00000535871 OR4F17Q8NGA8 305 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 DPF1Q92782 380 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 MRPL53Q96EL3 112 aaKnown RBP4.97□□□□□ -1.61
CDCA3-205ENST00000535871 OR4F4Q96R69 305 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 CITED1Q99966 193 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 PAXXQ9BUH6 204 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 SCRT1Q9BWW7 348 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 SLC25A2Q9BXI2 301 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 SLC25A22Q9H936 323 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 GNB4Q9HAV0 340 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 PRELID1Q9Y255 219 aa4.97□□□□□ -1.61
CDCA3-205ENST00000535871 TRAV25A0A0B4J276 109 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 IGHV7-4-1A0A0J9YVY3 117 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 PGPEP1LA6NFU8 196 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 F6UZH7 168 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 M0QZ24 198 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 CCL24O00175 119 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 OR7C2O60412 319 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 S100A9P06702 114 aaKnown RBP4.96□□□□□ -1.62
CDCA3-205ENST00000535871 NBEAP1P0C6P0 100 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 HOXD3P31249 432 aaPredicted RBP4.96□□□□□ -1.62
CDCA3-205ENST00000535871 PSG9Q00887 426 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 MEF2BQ02080 365 aaPredicted RBP4.96□□□□□ -1.62
CDCA3-205ENST00000535871 FAM74A3Q4VXF1 159 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 LCN15Q6UWW0 184 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 MIR17HGQ75NE6 70 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 OR8I2Q8N0Y5 310 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 KLHL30-AS1Q8NEE0 82 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 OR1N2Q8NGR9 330 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 OR2K2Q8NGT1 345 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 GLMPQ8WWB7 406 aa4.96□□□□□ -1.62
CDCA3-205ENST00000535871 TMEM158Q8WZ71 300 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms