RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 ARV1Q9H2C2 271 aa16.37■□□□□ 0.21
VPS37C-202ENST00000535818 KCNIP2Q9NS61 270 aa16.37■□□□□ 0.21
VPS37C-202ENST00000535818 ELOA3CA0A087WX78 387 aaPredicted RBP16.36■□□□□ 0.21
VPS37C-202ENST00000535818 COX7A2P2O60397 106 aa16.36■□□□□ 0.21
VPS37C-202ENST00000535818 LYL1P12980 280 aa16.36■□□□□ 0.21
VPS37C-202ENST00000535818 FGF7P21781 194 aa16.36■□□□□ 0.21
VPS37C-202ENST00000535818 RPL12P30050 165 aaKnown RBP16.36■□□□□ 0.21
VPS37C-202ENST00000535818 MEOX2P50222 304 aa16.36■□□□□ 0.21
VPS37C-202ENST00000535818 NHLH2Q02577 135 aa16.36■□□□□ 0.21
VPS37C-202ENST00000535818 OVOL2Q9BRP0 275 aa16.36■□□□□ 0.21
VPS37C-202ENST00000535818 HSPB11Q9Y547 144 aa16.36■□□□□ 0.21
VPS37C-202ENST00000535818 SPRY2O43597 315 aa16.35■□□□□ 0.21
VPS37C-202ENST00000535818 OR1L4Q8NGR5 311 aa16.35■□□□□ 0.21
VPS37C-202ENST00000535818 CHAC2Q8WUX2 184 aa16.35■□□□□ 0.21
VPS37C-202ENST00000535818 LINC00052Q96N35 136 aa16.35■□□□□ 0.21
VPS37C-202ENST00000535818 RSG1Q9BU20 258 aa16.35■□□□□ 0.21
VPS37C-202ENST00000535818 TP53TG1Q9Y2A0 90 aa16.35■□□□□ 0.21
VPS37C-202ENST00000535818 CA1P00915 261 aaPredicted RBP16.34■□□□□ 0.21
VPS37C-202ENST00000535818 ATF4P18848 351 aaPredicted RBP16.34■□□□□ 0.21
VPS37C-202ENST00000535818 RPL29P47914 159 aaKnown RBP16.34■□□□□ 0.21
VPS37C-202ENST00000535818 PSMB3P49720 205 aa16.34■□□□□ 0.21
VPS37C-202ENST00000535818 PATE2Q6UY27 113 aa16.34■□□□□ 0.21
VPS37C-202ENST00000535818 ZNF709Q8N972 641 aa16.34■□□□□ 0.21
VPS37C-202ENST00000535818 PFDN5Q99471 154 aa16.34■□□□□ 0.21
VPS37C-202ENST00000535818 EDA2RQ9HAV5 297 aa16.34■□□□□ 0.21
VPS37C-202ENST00000535818 TENM3Q9P273 2699 aa16.33■□□□□ 0.21
VPS37C-202ENST00000535818 RPL7P18124 248 aaKnown RBP16.33■□□□□ 0.2
VPS37C-202ENST00000535818 CLINT1Q14677 625 aa16.33■□□□□ 0.2
VPS37C-202ENST00000535818 MIC13Q5XKP0 118 aa16.33■□□□□ 0.2
VPS37C-202ENST00000535818 TRPT1Q86TN4 253 aaKnown RBP16.33■□□□□ 0.2
VPS37C-202ENST00000535818 C16orf92Q96LL3 132 aa16.33■□□□□ 0.2
VPS37C-202ENST00000535818 ATP5SQ99766 215 aa16.33■□□□□ 0.2
VPS37C-202ENST00000535818 C17orf112F2Z3M2 114 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 ISLRO14498 428 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 SOCS3O14543 225 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 IFNA5P01569 189 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 OPCMLQ14982 345 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 C10orf113Q5VZT2 155 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 LINC00305Q7Z4B0 112 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 MUC7Q8TAX7 377 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 STAB2Q8WWQ8 2551 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 RNF183Q96D59 192 aa16.32■□□□□ 0.2
VPS37C-202ENST00000535818 SPP1P10451 314 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 B2MP61769 119 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 PRR20EP86478 221 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 PRR20CP86479 221 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 PRR20DP86480 221 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 PRR20BP86481 221 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 PRR20AP86496 221 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 NPCDR1Q9BY65 106 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 SLC39A9Q9NUM3 307 aa16.31■□□□□ 0.2
VPS37C-202ENST00000535818 MORN3Q6PF18 240 aaPredicted RBP16.3■□□□□ 0.2
VPS37C-202ENST00000535818 INO80EQ8NBZ0 244 aaPredicted RBP16.3■□□□□ 0.2
VPS37C-202ENST00000535818 SCGB1C1Q8TD33 95 aa16.3■□□□□ 0.2
VPS37C-202ENST00000535818 PXMP4Q9Y6I8 212 aa16.3■□□□□ 0.2
VPS37C-202ENST00000535818 C3orf84H3BNL1 204 aa16.29■□□□□ 0.2
VPS37C-202ENST00000535818 OR2T35Q8NGX2 323 aa16.29■□□□□ 0.2
VPS37C-202ENST00000535818 TMEM37Q8WXS4 190 aa16.29■□□□□ 0.2
VPS37C-202ENST00000535818 WDR61Q9GZS3 305 aaKnown RBP16.29■□□□□ 0.2
VPS37C-202ENST00000535818 DNAJC4Q9NNZ3 241 aa16.29■□□□□ 0.2
VPS37C-202ENST00000535818 HLA-DRB4P13762 266 aa16.28■□□□□ 0.2
VPS37C-202ENST00000535818 LRRC20Q8TCA0 184 aa16.28■□□□□ 0.2
VPS37C-202ENST00000535818 GATAD1Q8WUU5 269 aa16.28■□□□□ 0.2
VPS37C-202ENST00000535818 AQP10Q96PS8 301 aa16.28■□□□□ 0.2
VPS37C-202ENST00000535818 RPRMQ9NS64 109 aa16.28■□□□□ 0.2
VPS37C-202ENST00000535818 HLA-DRB4X5D2U9 266 aa16.28■□□□□ 0.2
VPS37C-202ENST00000535818 NBEAL2Q6ZNJ1 2754 aa16.28■□□□□ 0.2
VPS37C-202ENST00000535818 H3BMM0 161 aa16.27■□□□□ 0.2
VPS37C-202ENST00000535818 DEFB1P60022 68 aa16.27■□□□□ 0.2
VPS37C-202ENST00000535818 NUTF2P61970 127 aaKnown RBP16.27■□□□□ 0.2
VPS37C-202ENST00000535818 ZNF266Q14584 549 aa16.27■□□□□ 0.2
VPS37C-202ENST00000535818 TMEM41BQ5BJD5 291 aa16.27■□□□□ 0.2
VPS37C-202ENST00000535818 EBLN2Q6P2I7 272 aa16.27■□□□□ 0.2
VPS37C-202ENST00000535818 FOXI2Q6ZQN5 318 aa16.27■□□□□ 0.2
VPS37C-202ENST00000535818 BPIFA4PQ86YQ2 179 aa16.27■□□□□ 0.2
VPS37C-202ENST00000535818 C17orf77Q96MU5 243 aa16.27■□□□□ 0.2
VPS37C-202ENST00000535818 PARD6GQ9BYG4 376 aaPredicted RBP16.27■□□□□ 0.2
VPS37C-202ENST00000535818 AGRNO00468 2067 aa16.26■□□□□ 0.19
VPS37C-202ENST00000535818 A0A087X0K7 114 aa16.26■□□□□ 0.19
VPS37C-202ENST00000535818 RARRES2Q99969 163 aa16.26■□□□□ 0.19
VPS37C-202ENST00000535818 SMIM3Q9BZL3 60 aa16.26■□□□□ 0.19
VPS37C-202ENST00000535818 SAV1Q9H4B6 383 aaPredicted RBP16.26■□□□□ 0.19
VPS37C-202ENST00000535818 FXYD6-FXYD2A0A087WZ82 144 aa16.25■□□□□ 0.19
VPS37C-202ENST00000535818 C4BPBP20851 252 aa16.25■□□□□ 0.19
VPS37C-202ENST00000535818 GDF5OSQ5U4N7 250 aa16.25■□□□□ 0.19
VPS37C-202ENST00000535818 MORN5Q5VZ52 161 aa16.25■□□□□ 0.19
VPS37C-202ENST00000535818 C20orf173Q96LM9 149 aa16.25■□□□□ 0.19
VPS37C-202ENST00000535818 IGKV3-20P01619 116 aa16.24■□□□□ 0.19
VPS37C-202ENST00000535818 SPATA31B1PQ5VZV4 182 aa16.24■□□□□ 0.19
VPS37C-202ENST00000535818 IGFL4Q6B9Z1 124 aa16.24■□□□□ 0.19
VPS37C-202ENST00000535818 OR4B1Q8NGF8 309 aa16.24■□□□□ 0.19
VPS37C-202ENST00000535818 OR11H2Q8NH07 326 aa16.24■□□□□ 0.19
VPS37C-202ENST00000535818 A0A0J9YWU9 116 aa16.23■□□□□ 0.19
VPS37C-202ENST00000535818 F6UB75 175 aa16.23■□□□□ 0.19
VPS37C-202ENST00000535818 MRPS12O15235 138 aaKnown RBP16.23■□□□□ 0.19
VPS37C-202ENST00000535818 CXCL2P19875 107 aa16.23■□□□□ 0.19
VPS37C-202ENST00000535818 ZFAND6Q6FIF0 208 aa16.23■□□□□ 0.19
VPS37C-202ENST00000535818 RNF182Q8N6D2 247 aa16.23■□□□□ 0.19
VPS37C-202ENST00000535818 IL17DQ8TAD2 202 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms