RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ZADH2Q8N4Q0 377 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 CHCHD1Q96BP2 118 aaKnown RBP10.68□□□□□ -0.7
HDAC4-214ENST00000535493 CELSR1Q9NYQ6 3014 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 GAGE12BA1L429 117 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 RBP4P02753 201 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 LIPFP07098 398 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 CD40P25942 277 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 LINC00574Q9H8X3 128 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 HILPDAQ9Y5L2 63 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 MAP1AP78559 2803 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-214ENST00000535493 SERTM2A0A1B0GWG4 89 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 M0R3E3 92 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 SP9P0CG40 484 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 IFI27P40305 119 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-214ENST00000535493 ATP5IP56385 69 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-214ENST00000535493 Q86TA4 180 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 WFDC8Q8IUA0 241 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 BCL6BQ8N143 479 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-214ENST00000535493 FMC1Q96HJ9 113 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 PRO3102Q9H379 93 aa10.67□□□□□ -0.7
HDAC4-214ENST00000535493 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 IGLV2-11P01706 119 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 GPR183P32249 361 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 PRSS57Q6UWY2 283 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 RHOGP84095 191 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 C2orf91Q6ZV80 131 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 PRSS3P2Q8NHM4 247 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 VSTM2AQ8TAG5 236 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 NCOR1P1Q9H4R4 102 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 COL12A1Q99715 3063 aa10.66□□□□□ -0.7
HDAC4-214ENST00000535493 C7orf71A4D174 169 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 HLA-DRB1P01911 266 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 NDFIP1Q9BT67 221 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 CEP295Q9C0D2 2601 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 MBD3L4A6NDZ8 208 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-214ENST00000535493 MBD3L3A6NE82 208 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-214ENST00000535493 MBD3L5A6NJ08 208 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-214ENST00000535493 K7EM74 188 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 OVOL3O00110 214 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 VMA21Q3ZAQ7 101 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 C12orf54Q6X4T0 127 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 PRSS33Q8NF86 280 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 STXBP6Q8NFX7 210 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 MBD3L2Q8NHZ7 208 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-214ENST00000535493 RAB37Q96AX2 223 aa10.65□□□□□ -0.7
HDAC4-214ENST00000535493 SPTBN1Q01082 2364 aaKnown RBP10.65□□□□□ -0.7
HDAC4-214ENST00000535493 RIPPLY3P57055 190 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 TM4SF20Q53R12 229 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 C8orf46Q8TAG6 207 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 SLC25A39Q9BZJ4 359 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-214ENST00000535493 HIGD1AQ9Y241 93 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 PTPRZ1P23471 2315 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-214ENST00000535493 A0A1B0GUT8 65 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 FAM231BA6NCW3 169 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 RPL27AP46776 148 aaKnown RBP10.64□□□□□ -0.71
HDAC4-214ENST00000535493 CRIP1P50238 77 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 KLF17Q5JT82 389 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-214ENST00000535493 TEX36Q5VZQ5 186 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 C8orf49Q96NF6 230 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 ZNF747Q9BV97 191 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 FBXL15Q9H469 300 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 TMEM133Q9H2Q1 129 aa10.64□□□□□ -0.71
HDAC4-214ENST00000535493 CUL9Q8IWT3 2517 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 TLN1Q9Y490 2541 aaKnown RBP10.63□□□□□ -0.71
HDAC4-214ENST00000535493 PPIAL4EA0A075B759 164 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 LYNX1G3V0Z9 82 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 PPIAL4FP0DN26 164 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 LYNX1P0DP58 116 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 ADIPOQQ15848 244 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 PET117Q6UWS5 81 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 FA2HQ7L5A8 372 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 BPIFA4PQ86YQ2 179 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 FAM169BQ8N8A8 192 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 D6R8Y8 96 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 HIST1H1AQ02539 215 aaPredicted RBP10.63□□□□□ -0.71
HDAC4-214ENST00000535493 PLA2G2CQ5R387 149 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 LINC01545Q5VT33 79 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 TRGV9Q99603 122 aa10.63□□□□□ -0.71
HDAC4-214ENST00000535493 C17orf100A8MU93 164 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 HAX1O00165 279 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 NDUFB3O43676 98 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 CRYGCP07315 174 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 DEFB124Q8NES8 71 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 TMEM186Q96B77 213 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 ZNF492Q9P255 531 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 RABAC1Q9UI14 185 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 A0A096LNJ9 63 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 COX7A1P24310 79 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 NHLH1Q02575 133 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 CT83Q5H943 113 aa10.62□□□□□ -0.71
HDAC4-214ENST00000535493 FAM162BQ5T6X4 162 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms