RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 LINC00052Q96N35 136 aa6.88□□□□□ -1.31
CDCA3-204ENST00000535406 SLC25A32Q9H2D1 315 aa6.88□□□□□ -1.31
CDCA3-204ENST00000535406 NPVFQ9HCQ7 196 aa6.88□□□□□ -1.31
CDCA3-204ENST00000535406 DOK5Q9P104 306 aa6.88□□□□□ -1.31
CDCA3-204ENST00000535406 LSM5Q9Y4Y9 91 aaKnown RBP6.88□□□□□ -1.31
CDCA3-204ENST00000535406 HLA-DRB4X5D2U9 266 aa6.88□□□□□ -1.31
CDCA3-204ENST00000535406 H3BMM0 161 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 K7EPK0 472 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 ISLRO14498 428 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 DEFB4AO15263 64 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 UPK1BO75841 260 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 MIFP14174 115 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 SELENOTP62341 195 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 TEPPQ6URK8 271 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 FOXI2Q6ZQN5 318 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 Q8NAQ8 132 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 C11orf45Q8TAV5 145 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 GPR82Q96P67 336 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 SCRT1Q9BWW7 348 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 C1QTNF4Q9BXJ3 329 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 MFFQ9GZY8 342 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 CLEC5AQ9NY25 188 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 HIGD1AQ9Y241 93 aa6.87□□□□□ -1.31
CDCA3-204ENST00000535406 ZNF705EA8MWA4 302 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 H3BRN7 92 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 HYPMO75409 117 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 OR5G3P0C626 314 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 PVALBP20472 110 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 BCAP31P51572 246 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 CAV2P51636 162 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 DEFB1P60022 68 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 NANOS2P60321 138 aaKnown RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 S100A10P60903 97 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 SLC38A11Q08AI6 406 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 GDF5OSQ5U4N7 250 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 CEMP1Q6PRD7 247 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 GSG1LQ6UXU4 331 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 S100A7AQ86SG5 101 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 ZNF546Q86UE3 836 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 PHLDA1Q8WV24 401 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 C2orf50Q96LR7 162 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 SHANK2-AS3Q9BTD1 123 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 GGACTQ9BVM4 153 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 SLC25A39Q9BZJ4 359 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 SAV1Q9H4B6 383 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 XCL2Q9UBD3 114 aa6.86□□□□□ -1.31
CDCA3-204ENST00000535406 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
CDCA3-204ENST00000535406 HYDINQ4G0P3 5121 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 IGHV4-28A0A0C4DH34 117 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 IGKV3-20P01619 116 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 RPL7P18124 248 aaKnown RBP6.85□□□□□ -1.31
CDCA3-204ENST00000535406 PLP1P60201 277 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 ARL16Q0P5N6 197 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 SPATA31B1PQ5VZV4 182 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 EBLN2Q6P2I7 272 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 CSNK1G2-AS1Q8NCQ2 148 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 OR4B1Q8NGF8 309 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 UHRF2Q96PU4 802 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 RSG1Q9BU20 258 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 ARL6Q9H0F7 186 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 GPN1Q9HCN4 374 aaPredicted RBP6.85□□□□□ -1.31
CDCA3-204ENST00000535406 RPRMQ9NS64 109 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
CDCA3-204ENST00000535406 F6UB75 175 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 GOSR2O14653 212 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 AGPAT2O15120 278 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 DEDDO75618 318 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 CST7O76096 145 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 FGL1Q08830 312 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 RAB32Q13637 225 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 PXDC1Q5TGL8 231 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 STX12Q86Y82 276 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 LINC00476Q8WZB0 136 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 C20orf173Q96LM9 149 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 ARV1Q9H2C2 271 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 C11orf1Q9H5F2 150 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 LYRM2Q9NU23 88 aaPredicted RBP6.84□□□□□ -1.31
CDCA3-204ENST00000535406 RNF24Q9Y225 148 aa6.84□□□□□ -1.31
CDCA3-204ENST00000535406 A0A0J9YX75 114 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 FAM24AA6NFZ4 105 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 PRAF2O60831 178 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 RBMY1A1P0DJD3 496 aaKnown RBP6.83□□□□□ -1.32
CDCA3-204ENST00000535406 RBMY1CP0DJD4 496 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 SULT1A1P50225 295 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 FXYD7P58549 80 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 IFITM3Q01628 133 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 RBMY1FQ15415 496 aaKnown RBP6.83□□□□□ -1.32
CDCA3-204ENST00000535406 FAM78BQ5VT40 261 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 NRARPQ7Z6K4 114 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 ZNF709Q8N972 641 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 C17orf77Q96MU5 243 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 MGST2Q99735 147 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 HRH4Q9H3N8 390 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 BATF3Q9NR55 127 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 UQCC1Q9NVA1 299 aa6.83□□□□□ -1.32
CDCA3-204ENST00000535406 A0A087X0K7 114 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms