RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 F6UB75 175 aa11.62□□□□□ -0.55
CLSTN3-204ENST00000535313 OR4E1P0C645 316 aa11.62□□□□□ -0.55
CLSTN3-204ENST00000535313 C4orf46Q504U0 113 aa11.62□□□□□ -0.55
CLSTN3-204ENST00000535313 TMEM182Q6ZP80 229 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-204ENST00000535313 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
CLSTN3-204ENST00000535313 RFNGQ9Y644 331 aa11.62□□□□□ -0.55
CLSTN3-204ENST00000535313 SSSCA1O60232 199 aa11.61□□□□□ -0.55
CLSTN3-204ENST00000535313 AMBPP02760 352 aa11.61□□□□□ -0.55
CLSTN3-204ENST00000535313 IL5P05113 134 aa11.61□□□□□ -0.55
CLSTN3-204ENST00000535313 CYP2G1PQ6ZSU1 146 aa11.61□□□□□ -0.55
CLSTN3-204ENST00000535313 C20orf173Q96LM9 149 aa11.61□□□□□ -0.55
CLSTN3-204ENST00000535313 NDUFAF3Q9BU61 184 aa11.61□□□□□ -0.55
CLSTN3-204ENST00000535313 DOK5Q9P104 306 aa11.61□□□□□ -0.55
CLSTN3-204ENST00000535313 TEX48A0A1B0GUV7 120 aa11.6□□□□□ -0.55
CLSTN3-204ENST00000535313 ANXA7P20073 488 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-204ENST00000535313 RAP2BP61225 183 aa11.6□□□□□ -0.55
CLSTN3-204ENST00000535313 SMIM8Q96KF7 97 aa11.6□□□□□ -0.55
CLSTN3-204ENST00000535313 C20orf85Q9H1P6 137 aa11.6□□□□□ -0.55
CLSTN3-204ENST00000535313 HYPMO75409 117 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 SCGB1D2O95969 90 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 HBE1P02100 147 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 TCRBP04435 133 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 FGL1Q08830 312 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 S100A7AQ86SG5 101 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 SCRT1Q9BWW7 348 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 SLC25A39Q9BZJ4 359 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 HIGD1AQ9Y241 93 aa11.59□□□□□ -0.55
CLSTN3-204ENST00000535313 H3BRN7 92 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 DUSP14O95147 198 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 LINC00869P0C866 280 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 P0DMU3 169 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 FAM231AP0DMU4 169 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 FAM231CP0DMU5 169 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 RPL7P18124 248 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 RRAS2P62070 204 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 SELENOTP62341 195 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 IAH1Q2TAA2 248 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 C17orf77Q96MU5 243 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 SHANK2-AS3Q9BTD1 123 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 TMEM208Q9BTX3 173 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 DKK2Q9UBU2 259 aa11.58□□□□□ -0.56
CLSTN3-204ENST00000535313 TRAV6A0A075B6T7 132 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 LOC102723971A0A1B0GUV8 181 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 PMS2P5A8MQ11 134 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 OR5G3P0C626 314 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 METTL15P1P0C7V9 234 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 DLK1P80370 383 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 RRN3P1Q2M238 152 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 TMEM14EPQ6UXP3 125 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 NRARPQ7Z6K4 114 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 C1orf158Q8N1D5 194 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 OR10P1Q8NGE3 313 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 NPVFQ9HCQ7 196 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 NUDT15Q9NV35 164 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 GSKIPQ9P0R6 139 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 MGAT4CQ9UBM8 478 aa11.57□□□□□ -0.56
CLSTN3-204ENST00000535313 A8MTW9 85 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 FNDC10F2Z333 226 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 TSC22D2O75157 780 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 CNN1P51911 297 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 TAS2R30P59541 319 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 PLP1P60201 277 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 ZBTB8BQ8NAP8 495 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 MITD1Q8WV92 249 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 IGF2BP2-AS1Q96M15 143 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 RNF24Q9Y225 148 aa11.56□□□□□ -0.56
CLSTN3-204ENST00000535313 TRAV8-2A0A0B4J237 113 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 FAM240BA0A1B0GVZ2 78 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 CCNKO75909 580 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 IGFL4Q6B9Z1 124 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 TEPPQ6URK8 271 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 AMTNQ6UX39 209 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 RNF182Q8N6D2 247 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 ZNF738Q8NE65 137 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 FAM210BQ96KR6 192 aa11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 YTHDF2Q9Y5A9 579 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-204ENST00000535313 INSP01308 110 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 SLC38A11Q08AI6 406 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 OXA1LQ15070 435 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 SPINK13Q1W4C9 94 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 MZT2BQ6NZ67 158 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 OR11H7Q8NGC8 314 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 LRRC20Q8TCA0 184 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 UHRF2Q96PU4 802 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 SEC22CQ9BRL7 303 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 ARL6Q9H0F7 186 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 RCL1Q9Y2P8 373 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 HECTD4Q9Y4D8 3996 aa11.54□□□□□ -0.56
CLSTN3-204ENST00000535313 K7EPK0 472 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 M0R2Z0 102 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 GOSR2O14653 212 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 H2AFB2P0C5Z0 115 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 HTN3P15516 51 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 PXDC1Q5TGL8 231 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 ZNF546Q86UE3 836 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 ARV1Q9H2C2 271 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms