RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 E7EQL1 145 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 DOCK4Q8N1I0 1966 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 TET1Q8NFU7 2136 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 TNFSF13O75888 250 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 PRTN3P24158 256 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 LYPD1Q8N2G4 141 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BKO60814 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BJP06899 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BOP23527 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BBP33778 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BDP58876 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BCP62807 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 SUPT4H1P63272 117 aaKnown RBP14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST2H2BEQ16778 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BHQ93079 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BNQ99877 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 HIST1H2BMQ99879 126 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 RUSC1-AS1Q66K80 236 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 TMEM14EPQ6UXP3 125 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 TRBV6-6A0A0A6YYG2 114 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 TRAV13-1A0A0B4J241 112 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 B3GALT5-AS1P59052 145 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 DEFB131AP59861 70 aa14.79□□□□□ -0.04
SFSWAP-203ENST00000535236 NMSQ5H8A3 153 aa14.78□□□□□ -0.04
SFSWAP-203ENST00000535236 PRR31Q5SQ13 230 aa14.78□□□□□ -0.04
SFSWAP-203ENST00000535236 SBF2Q86WG5 1849 aa14.78□□□□□ -0.04
SFSWAP-203ENST00000535236 RASL11AQ6T310 242 aa14.78□□□□□ -0.04
SFSWAP-203ENST00000535236 BMPERQ8N8U9 685 aa14.78□□□□□ -0.04
SFSWAP-203ENST00000535236 CACNA1EQ15878 2313 aa14.78□□□□□ -0.04
SFSWAP-203ENST00000535236 EP300Q09472 2414 aaPredicted RBP14.78□□□□□ -0.04
SFSWAP-203ENST00000535236 TMEM242Q9NWH2 141 aa14.77□□□□□ -0.04
SFSWAP-203ENST00000535236 A0A087WWL8 130 aa14.77□□□□□ -0.05
SFSWAP-203ENST00000535236 LGALS1P09382 135 aaKnown RBP14.77□□□□□ -0.05
SFSWAP-203ENST00000535236 HGFACQ04756 655 aa14.77□□□□□ -0.05
SFSWAP-203ENST00000535236 RALGAPA2Q2PPJ7 1873 aa14.77□□□□□ -0.05
SFSWAP-203ENST00000535236 SAMD5Q5TGI4 173 aa14.77□□□□□ -0.05
SFSWAP-203ENST00000535236 C5orf63A6NC05 138 aa14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 NTF4P34130 210 aa14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 SRSF8Q9BRL6 282 aaKnown RBP14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 TRAV1-1A0A0B4J248 108 aa14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 CEACAM8P31997 349 aaPredicted RBP14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 DMRTC2Q8IXT2 367 aaPredicted RBP14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 NDUFAF3Q9BU61 184 aa14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 CHD5Q8TDI0 1954 aa14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 K7ENP7 123 aa14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 LEPROTO15243 131 aa14.76□□□□□ -0.05
SFSWAP-203ENST00000535236 GAGE13Q4V321 117 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 Q96MF0 132 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 MYMXA0A1B0GTQ4 84 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 LINC01619G3V211 115 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 LINC01551Q86U37 167 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 RPP25LQ8N5L8 163 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 GLRX5Q86SX6 157 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 UBE2E1P51965 193 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 PRR30Q53SZ7 412 aaPredicted RBP14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 C5orf24Q7Z6I8 188 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 MAPK1IP1LQ8NDC0 245 aa14.75□□□□□ -0.05
SFSWAP-203ENST00000535236 RPRMLQ8N4K4 120 aa14.74□□□□□ -0.05
SFSWAP-203ENST00000535236 LOC285556D6RIA3 1793 aa14.74□□□□□ -0.05
SFSWAP-203ENST00000535236 NUP35Q8NFH5 326 aa14.74□□□□□ -0.05
SFSWAP-203ENST00000535236 KLHDC3Q9BQ90 382 aa14.74□□□□□ -0.05
SFSWAP-203ENST00000535236 TRBV24-1A0A075B6N3 115 aa14.74□□□□□ -0.05
SFSWAP-203ENST00000535236 RNASE2P10153 161 aaKnown RBP14.74□□□□□ -0.05
SFSWAP-203ENST00000535236 ALPK2Q86TB3 2170 aa14.74□□□□□ -0.05
SFSWAP-203ENST00000535236 DAD1P61803 113 aa14.74□□□□□ -0.05
SFSWAP-203ENST00000535236 F5H768 121 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 HIST1H4AP62805 103 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 ARHGEF17Q96PE2 2063 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 AKAP6Q13023 2319 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 THADAQ6YHU6 1953 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 TRAV8-1A0A0A6YYK1 113 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 PRIMA1Q86XR5 153 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 ANAPC10Q9UM13 185 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 ITGB1BP1O14713 200 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 AMBPP02760 352 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 TMEM158Q8WZ71 300 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 TIMM21Q9BVV7 248 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 LIME1Q9H400 295 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 A6NNC1 897 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 LINC00205P59089 165 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 XCL2Q9UBD3 114 aa14.73□□□□□ -0.05
SFSWAP-203ENST00000535236 SRSF4Q08170 494 aaKnown RBP14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 LY6G5BQ8NDX9 201 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 OVOL2Q9BRP0 275 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 LY96Q9Y6Y9 160 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 ATP6V0E1O15342 81 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 FAM110DQ8TAY7 271 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 SHANK2-AS3Q9BTD1 123 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 SDK2Q58EX2 2172 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 IGHV1-69DA0A0B4J2H0 117 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 IGHV1-69P01742 117 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 BCL6BQ8N143 479 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 HIST1H2BLQ99880 126 aa14.72□□□□□ -0.05
SFSWAP-203ENST00000535236 CXCL1P09341 107 aa14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 FAM90A2PQ658T7 463 aa14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 ANAPC13Q9BS18 74 aa14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 CYTL1Q9NRR1 136 aa14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 GVINP1Q7Z2Y8 2422 aa14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 A0A1B0GW64 132 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms