RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 FMC1Q96HJ9 113 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 TM4SF5O14894 197 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 NCR2O95944 276 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 GUSBP1Q15486 140 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 TWIST1Q15672 202 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 ATP5L2Q7Z4Y8 100 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 GUCD1Q96NT3 240 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 PEF1Q9UBV8 284 aaKnown RBP12.77□□□□□ -0.37
MCF2L-232ENST00000535094 ADGRG4Q8IZF6 3080 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 NCBP2LA6PVI3 153 aaKnown RBP12.76□□□□□ -0.37
MCF2L-232ENST00000535094 C22orf46C9J442 243 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 FNDC10F2Z333 226 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 GNG7O60262 68 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 FTH1P19P0C7X4 201 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 CKS2P33552 79 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 IFI27P40305 119 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-232ENST00000535094 ATP5IP56385 69 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-232ENST00000535094 IGFL4Q6B9Z1 124 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 RASL11AQ6T310 242 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 TMEM186Q96B77 213 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 LOC105371242A0A075B767 164 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 IGHV3OR16-13A0A075B7E8 117 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 IGHV3-74A0A0B4J1X5 117 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 IGHV2-70DA0A0C4DH43 119 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 RBX1P62877 108 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 OCIAD2Q56VL3 154 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 FAM231DQ6ZW35 169 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 TMEM167AQ8TBQ9 72 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 IGHG3P01860 377 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 C22orf34Q6ZV56 151 aa12.76□□□□□ -0.37
MCF2L-232ENST00000535094 Q71RC1 249 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-232ENST00000535094 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-232ENST00000535094 CGB1A6NKQ9 187 aa12.75□□□□□ -0.37
MCF2L-232ENST00000535094 PPIFP30405 207 aaKnown RBP12.75□□□□□ -0.37
MCF2L-232ENST00000535094 RUSC1-AS1Q66K80 236 aa12.75□□□□□ -0.37
MCF2L-232ENST00000535094 CHCHD1Q96BP2 118 aaKnown RBP12.75□□□□□ -0.37
MCF2L-232ENST00000535094 TMEM189A5PLL7 270 aa12.75□□□□□ -0.37
MCF2L-232ENST00000535094 D6R8Y8 96 aa12.75□□□□□ -0.37
MCF2L-232ENST00000535094 GTF2H5Q6ZYL4 71 aa12.75□□□□□ -0.37
MCF2L-232ENST00000535094 MBD6Q96DN6 1003 aa12.75□□□□□ -0.37
MCF2L-232ENST00000535094 DKK4Q9UBT3 224 aa12.75□□□□□ -0.37
MCF2L-232ENST00000535094 DSCAML1Q8TD84 2053 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 TRAV8-6A0A0B4J262 113 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 C16orf97H3BN30 126 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 J3KRW8 73 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 CGB3P0DN86 165 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 CGB7P0DN87 165 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 MC5RP33032 325 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 BSPH1Q075Z2 132 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 POU2AF1Q16633 256 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 TMEM97Q5BJF2 176 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 PRELID3AQ96N28 172 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 SCNM1Q9BWG6 230 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 RALYQ9UKM9 306 aaKnown RBP12.74□□□□□ -0.37
MCF2L-232ENST00000535094 PCSK5Q92824 1860 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 TMEM213A2RRL7 107 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 C17orf100A8MU93 164 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 TAX1BP3O14907 124 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 TACC2O95359 2948 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 A6NDN8 102 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 HIST1H1AQ02539 215 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-232ENST00000535094 PET117Q6UWS5 81 aa12.74□□□□□ -0.37
MCF2L-232ENST00000535094 SLC25A39Q9BZJ4 359 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-232ENST00000535094 FAM231BA6NCW3 169 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 TOMM40O96008 361 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 C1orf185Q5T7R7 199 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 SAP30O75446 220 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 OR2J3O76001 311 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 LHBP01229 141 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 OR5AN1Q8NGI8 311 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 TMEM133Q9H2Q1 129 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 PSG8Q9UQ74 426 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 KALRNO60229 2985 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 Q86TA4 180 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 C8orf46Q8TAG6 207 aa12.73□□□□□ -0.37
MCF2L-232ENST00000535094 ZNF883P0CG24 379 aa12.72□□□□□ -0.37
MCF2L-232ENST00000535094 KLF5Q13887 457 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-232ENST00000535094 GFRALQ6UXV0 394 aa12.72□□□□□ -0.37
MCF2L-232ENST00000535094 WIPF2Q8TF74 440 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-232ENST00000535094 ZNF414Q96IQ9 312 aa12.72□□□□□ -0.37
MCF2L-232ENST00000535094 IGKV1D-37A0A075B6S9 117 aa12.72□□□□□ -0.37
MCF2L-232ENST00000535094 Q8TAT8 98 aa12.72□□□□□ -0.37
MCF2L-232ENST00000535094 A1L4Q6 167 aa12.72□□□□□ -0.37
MCF2L-232ENST00000535094 PPP1R27Q86WC6 154 aa12.72□□□□□ -0.37
MCF2L-232ENST00000535094 IGF2RP11717 2491 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 ATMQ13315 3056 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 TMEM265A0A087WTH1 108 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 ITGB1BP1O14713 200 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 FAM106CPP0CH98 169 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 LGALS7P47929 136 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 FAM106AQ4KMX7 169 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 HIF1ANQ9NWT6 349 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 ZNF833PQ6ZTB9 187 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 SEM1Q6ZVN7 128 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 URB1-AS1Q96HZ7 61 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 OTORQ9NRC9 128 aa12.71□□□□□ -0.37
MCF2L-232ENST00000535094 NPIPB5A8MRT5 1133 aa12.71□□□□□ -0.38
MCF2L-232ENST00000535094 EVI2AP22794 236 aa12.71□□□□□ -0.38
MCF2L-232ENST00000535094 LYZL1Q6UWQ5 148 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms