RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 STHQ8IWL8 128 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 TMEM252Q8N6L7 170 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 BPIFCQ8NFQ6 507 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 OR1B1Q8NGR6 318 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 RARRES2Q99969 163 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 MARVELD1Q9BSK0 173 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 SHANK2-AS3Q9BTD1 123 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 RSG1Q9BU20 258 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 RNF126Q9BV68 326 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 SLC25A39Q9BZJ4 359 aaPredicted RBP3.65□□□□□ -1.83
USH1C-210ENST00000534556 ARL6Q9H0F7 186 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 SLC35B3Q9H1N7 401 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 SLC25A22Q9H936 323 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 NPVFQ9HCQ7 196 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 XCL2Q9UBD3 114 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 HLA-DRB4X5D2U9 266 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 MUC4Q99102 2169 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 PRAC2D3DTV9 90 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 FNDC10F2Z333 226 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 INMT-MINDY4F8WBC2 141 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 H3BQ15 152 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 SLC17A3O00476 420 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 CRXO43186 299 aaPredicted RBP3.64□□□□□ -1.83
USH1C-210ENST00000534556 CXCL3P19876 107 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 PRR20EP86478 221 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 PRR20CP86479 221 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 PRR20DP86480 221 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 PRR20BP86481 221 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 PRR20AP86496 221 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 KIR3DS1Q14943 382 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 OPCMLQ14982 345 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 GCSAMLQ5JQS6 135 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 C1orf194Q5T5A4 169 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 SPATA31B1PQ5VZV4 182 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 MIC13Q5XKP0 118 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 MZT2BQ6NZ67 158 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 ZNF767PQ75MW2 155 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 OR8I2Q8N0Y5 310 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 C1orf158Q8N1D5 194 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 TMEM217Q8N7C4 229 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 GATAD1Q8WUU5 269 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 PHLDA1Q8WV24 401 aaPredicted RBP3.64□□□□□ -1.83
USH1C-210ENST00000534556 LINC00052Q96N35 136 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 C11orf68Q9H3H3 251 aaKnown RBP3.64□□□□□ -1.83
USH1C-210ENST00000534556 SAV1Q9H4B6 383 aaPredicted RBP3.64□□□□□ -1.83
USH1C-210ENST00000534556 SEPSECSQ9HD40 501 aaKnown RBP3.64□□□□□ -1.83
USH1C-210ENST00000534556 PLA2G2EQ9NZK7 142 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 WDR83OSQ9Y284 106 aa3.64□□□□□ -1.83
USH1C-210ENST00000534556 A0A087X0K7 114 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 PIGBOS1A0A0B4J2F0 54 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 ZNF705FA8MVS1 300 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 ISLRO14498 428 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 GOSR2O14653 212 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 HYPMO75409 117 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 EIF3GO75821 320 aaKnown RBP eCLIP3.63□□□□□ -1.83
USH1C-210ENST00000534556 OR5G3P0C626 314 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 SPP1P10451 314 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 ATF4P18848 351 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 PSMB3P49720 205 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 AP2S1P53680 142 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 S100A10P60903 97 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 RPP30P78346 268 aaKnown RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 C12orf74Q32Q52 190 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 Q5BKY6 102 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 FAM78BQ5VT40 261 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 MORN3Q6PF18 240 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 CEMP1Q6PRD7 247 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 TEPPQ6URK8 271 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 ZNF705AQ6ZN79 300 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 FOXI2Q6ZQN5 318 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 OR10P1Q8NGE3 313 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 ENKURQ8TC29 256 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 LINC00476Q8WZB0 136 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 PPP1R14BQ96C90 147 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 SAT2Q96F10 170 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 NARS2Q96I59 477 aaKnown RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 CLUHP3Q96NS8 147 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 PARD6GQ9BYG4 376 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 ARV1Q9H2C2 271 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 WFDC1Q9HC57 220 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 BATF3Q9NR55 127 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 LYRM2Q9NU23 88 aaPredicted RBP3.63□□□□□ -1.83
USH1C-210ENST00000534556 HIGD1AQ9Y241 93 aa3.63□□□□□ -1.83
USH1C-210ENST00000534556 UBE2L5PA0A1B0GUS4 154 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 CXorf65A6NEN9 183 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 L7N2F9 121 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 M0R2Z0 102 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 SCGB2A1O75556 95 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 NDUFB4O95168 129 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 CFDP00746 253 aaPredicted RBP3.62□□□□□ -1.83
USH1C-210ENST00000534556 IGLC2P0DOY2 106 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 AZU1P20160 251 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 CAMLGP49069 296 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 SULT1A1P50225 295 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 BCAP31P51572 246 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 CAV2P51636 162 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 CNN1P51911 297 aaKnown RBP3.62□□□□□ -1.83
USH1C-210ENST00000534556 SELENOTP62341 195 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 VAMP2P63027 116 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 FGL1Q08830 312 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms