RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 GSG1LQ6UXU4 331 aa13.74□□□□□ -0.21
LRRK1-210ENST00000534045 C12orf45Q8N5I9 185 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-210ENST00000534045 LRRC20Q8TCA0 184 aa13.74□□□□□ -0.21
LRRK1-210ENST00000534045 S100ZQ8WXG8 99 aa13.74□□□□□ -0.21
LRRK1-210ENST00000534045 SLC25A39Q9BZJ4 359 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-210ENST00000534045 RCL1Q9Y2P8 373 aaKnown RBP13.74□□□□□ -0.21
LRRK1-210ENST00000534045 LSM5Q9Y4Y9 91 aaKnown RBP13.74□□□□□ -0.21
LRRK1-210ENST00000534045 CCNKO75909 580 aa13.73□□□□□ -0.21
LRRK1-210ENST00000534045 PVALBP20472 110 aaPredicted RBP13.73□□□□□ -0.21
LRRK1-210ENST00000534045 FAM78BQ5VT40 261 aa13.73□□□□□ -0.21
LRRK1-210ENST00000534045 LINC00299Q6ZSB3 139 aa13.73□□□□□ -0.21
LRRK1-210ENST00000534045 SCRT1Q9BWW7 348 aa13.73□□□□□ -0.21
LRRK1-210ENST00000534045 ARL6Q9H0F7 186 aa13.73□□□□□ -0.21
LRRK1-210ENST00000534045 ELOA3CA0A087WX78 387 aaPredicted RBP13.72□□□□□ -0.21
LRRK1-210ENST00000534045 C7orf66A4D0T2 115 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 SMIM9A6NGZ8 99 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 F6UB75 175 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 CAV2P51636 162 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 RAB31Q13636 194 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 LGALS9CQ6DKI2 356 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 CLUHP3Q96NS8 147 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 SEC22CQ9BRL7 303 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 SHANK2-AS3Q9BTD1 123 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 GGACTQ9BVM4 153 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 GOLT1BQ9Y3E0 138 aa13.72□□□□□ -0.21
LRRK1-210ENST00000534045 TRAV10A0A0B4J240 114 aa13.71□□□□□ -0.21
LRRK1-210ENST00000534045 EMP1P54849 157 aa13.71□□□□□ -0.21
LRRK1-210ENST00000534045 SLC38A11Q08AI6 406 aa13.71□□□□□ -0.21
LRRK1-210ENST00000534045 ZNF546Q86UE3 836 aa13.71□□□□□ -0.21
LRRK1-210ENST00000534045 C2orf50Q96LR7 162 aa13.71□□□□□ -0.21
LRRK1-210ENST00000534045 DNAH1Q9P2D7 4330 aa13.71□□□□□ -0.22
LRRK1-210ENST00000534045 A0A0J9YX75 114 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 TMEM189A5PLL7 270 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 H3BRN7 92 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 DEDDO75618 318 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 DUSP14O95147 198 aaKnown RBP13.7□□□□□ -0.22
LRRK1-210ENST00000534045 PLP1P60201 277 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 PXDC1Q5TGL8 231 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 TMEM208Q9BTX3 173 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 SLC35B3Q9H1N7 401 aa13.7□□□□□ -0.22
LRRK1-210ENST00000534045 K7EPK0 472 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 S100A10P60903 97 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 Q6ZTC4 211 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 C20orf173Q96LM9 149 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 UHRF2Q96PU4 802 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 NEU1Q99519 415 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 ARV1Q9H2C2 271 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 PPP1R14DQ9NXH3 145 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 RFNGQ9Y644 331 aa13.69□□□□□ -0.22
LRRK1-210ENST00000534045 AGPAT2O15120 278 aa13.68□□□□□ -0.22
LRRK1-210ENST00000534045 COX7A2P2O60397 106 aa13.68□□□□□ -0.22
LRRK1-210ENST00000534045 SPART-AS1P0CW21 52 aa13.68□□□□□ -0.22
LRRK1-210ENST00000534045 IGFL4Q6B9Z1 124 aa13.68□□□□□ -0.22
LRRK1-210ENST00000534045 ZNF705AQ6ZN79 300 aaPredicted RBP13.68□□□□□ -0.22
LRRK1-210ENST00000534045 Q6ZRG5 221 aa13.68□□□□□ -0.22
LRRK1-210ENST00000534045 ZNF738Q8NE65 137 aa13.68□□□□□ -0.22
LRRK1-210ENST00000534045 ENKURQ8TC29 256 aa13.68□□□□□ -0.22
LRRK1-210ENST00000534045 GPN1Q9HCN4 374 aaPredicted RBP13.68□□□□□ -0.22
LRRK1-210ENST00000534045 DEFB131BA0A096LNP1 70 aa13.67□□□□□ -0.22
LRRK1-210ENST00000534045 CST7O76096 145 aa13.67□□□□□ -0.22
LRRK1-210ENST00000534045 HBE1P02100 147 aa13.67□□□□□ -0.22
LRRK1-210ENST00000534045 ARL16Q0P5N6 197 aa13.67□□□□□ -0.22
LRRK1-210ENST00000534045 ZNF767PQ75MW2 155 aa13.67□□□□□ -0.22
LRRK1-210ENST00000534045 ZNF709Q8N972 641 aa13.67□□□□□ -0.22
LRRK1-210ENST00000534045 FAM24AA6NFZ4 105 aa13.66□□□□□ -0.22
LRRK1-210ENST00000534045 ZNF705FA8MVS1 300 aaPredicted RBP13.66□□□□□ -0.22
LRRK1-210ENST00000534045 AMBPP02760 352 aa13.66□□□□□ -0.22
LRRK1-210ENST00000534045 ZNF705DP0CH99 300 aaPredicted RBP13.66□□□□□ -0.22
LRRK1-210ENST00000534045 ZNF705BP0CI00 300 aaPredicted RBP13.66□□□□□ -0.22
LRRK1-210ENST00000534045 RHOBP62745 196 aa13.66□□□□□ -0.22
LRRK1-210ENST00000534045 C12orf74Q32Q52 190 aa13.66□□□□□ -0.22
LRRK1-210ENST00000534045 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
LRRK1-210ENST00000534045 RNF182Q8N6D2 247 aa13.66□□□□□ -0.22
LRRK1-210ENST00000534045 CELA1Q9UNI1 258 aa13.66□□□□□ -0.22
LRRK1-210ENST00000534045 PLECQ15149 4684 aaKnown RBP13.66□□□□□ -0.22
LRRK1-210ENST00000534045 CAMLGP49069 296 aa13.65□□□□□ -0.22
LRRK1-210ENST00000534045 CNN1P51911 297 aaKnown RBP13.65□□□□□ -0.22
LRRK1-210ENST00000534045 ASAH1Q13510 395 aa13.65□□□□□ -0.22
LRRK1-210ENST00000534045 RRN3P1Q2M238 152 aa13.65□□□□□ -0.22
LRRK1-210ENST00000534045 STX12Q86Y82 276 aa13.65□□□□□ -0.22
LRRK1-210ENST00000534045 BPIFA4PQ86YQ2 179 aa13.65□□□□□ -0.22
LRRK1-210ENST00000534045 UQCC1Q9NVA1 299 aa13.65□□□□□ -0.22
LRRK1-210ENST00000534045 ALMS1Q8TCU4 4167 aa13.65□□□□□ -0.22
LRRK1-210ENST00000534045 TRAV8-2A0A0B4J237 113 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 TEX48A0A1B0GUV7 120 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 S100A11P31949 105 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 HBG1P69891 147 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 HBG2P69892 147 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 C10orf113Q5VZT2 155 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 PATE2Q6UY27 113 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 IGF2BP2-AS1Q96M15 143 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 C17orf77Q96MU5 243 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 APLNQ9ULZ1 77 aa13.64□□□□□ -0.23
LRRK1-210ENST00000534045 IGHV4-4A0A075B6R2 117 aa13.63□□□□□ -0.23
LRRK1-210ENST00000534045 A0A087X0K7 114 aa13.63□□□□□ -0.23
LRRK1-210ENST00000534045 LOC102723971A0A1B0GUV8 181 aa13.63□□□□□ -0.23
LRRK1-210ENST00000534045 RLN2P04090 185 aa13.63□□□□□ -0.23
LRRK1-210ENST00000534045 HIST1H1AQ02539 215 aaPredicted RBP13.63□□□□□ -0.23
LRRK1-210ENST00000534045 PSG3Q16557 428 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms