RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 M6PRP20645 277 aa11.71□□□□□ -0.53
CTTN-215ENST00000533931 GALR1P47211 349 aa11.71□□□□□ -0.53
CTTN-215ENST00000533931 CMC4P56277 68 aaPredicted RBP11.71□□□□□ -0.53
CTTN-215ENST00000533931 ACOT6Q3I5F7 207 aaPredicted RBP11.71□□□□□ -0.53
CTTN-215ENST00000533931 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.53
CTTN-215ENST00000533931 UHRF2Q96PU4 802 aa11.71□□□□□ -0.53
CTTN-215ENST00000533931 SCRT1Q9BWW7 348 aa11.71□□□□□ -0.53
CTTN-215ENST00000533931 IGHV3-66A0A0C4DH42 116 aa11.7□□□□□ -0.54
CTTN-215ENST00000533931 IZUMO1RA6ND01 250 aa11.7□□□□□ -0.54
CTTN-215ENST00000533931 TPT1P13693 172 aaKnown RBP11.7□□□□□ -0.54
CTTN-215ENST00000533931 KRTAP10-11P60412 298 aa11.7□□□□□ -0.54
CTTN-215ENST00000533931 BPIFA4PQ86YQ2 179 aa11.7□□□□□ -0.54
CTTN-215ENST00000533931 STXBP6Q8NFX7 210 aa11.7□□□□□ -0.54
CTTN-215ENST00000533931 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
CTTN-215ENST00000533931 SLC25A32Q9H2D1 315 aa11.7□□□□□ -0.54
CTTN-215ENST00000533931 NRN1Q9NPD7 142 aa11.7□□□□□ -0.54
CTTN-215ENST00000533931 A0A087X0K7 114 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 SEC11BP0C7V7 166 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 SPP1P10451 314 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 RHOBP62745 196 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 GUCA2BQ16661 112 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 GTSCR1Q86UQ5 136 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 MS4A6AQ9H2W1 248 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 SLC25A22Q9H936 323 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 TMEM14CQ9P0S9 112 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 FUT9Q9Y231 359 aa11.69□□□□□ -0.54
CTTN-215ENST00000533931 RPL11P62913 178 aaKnown RBP11.68□□□□□ -0.54
CTTN-215ENST00000533931 FAM78BQ5VT40 261 aa11.68□□□□□ -0.54
CTTN-215ENST00000533931 EIF5AL1Q6IS14 154 aaKnown RBP11.68□□□□□ -0.54
CTTN-215ENST00000533931 SLC51BQ86UW2 128 aa11.68□□□□□ -0.54
CTTN-215ENST00000533931 BAP18Q8IXM2 172 aa11.68□□□□□ -0.54
CTTN-215ENST00000533931 DCANP1Q8TF63 244 aa11.68□□□□□ -0.54
CTTN-215ENST00000533931 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
CTTN-215ENST00000533931 UMAD1C9J7I0 102 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 K7EQG2 157 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 DNASE2O00115 360 aaPredicted RBP11.67□□□□□ -0.54
CTTN-215ENST00000533931 MRPS12O15235 138 aaKnown RBP11.67□□□□□ -0.54
CTTN-215ENST00000533931 TAS2R45P59539 299 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 GUK1Q16774 197 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 TMEM41BQ5BJD5 291 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 GCSAMLQ5JQS6 135 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 OR10G4Q8NGN3 311 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 OR10G9Q8NGN4 311 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 OR10G7Q8NGN6 311 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 MEGF8Q7Z7M0 2845 aa11.67□□□□□ -0.54
CTTN-215ENST00000533931 FBN3Q75N90 2809 aa11.66□□□□□ -0.54
CTTN-215ENST00000533931 IGLC2P0DOY2 106 aa11.66□□□□□ -0.54
CTTN-215ENST00000533931 ATF4P18848 351 aaPredicted RBP11.66□□□□□ -0.54
CTTN-215ENST00000533931 LEMD1Q68G75 181 aa11.66□□□□□ -0.54
CTTN-215ENST00000533931 A0A1W2PPV4 95 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 ISLRO14498 428 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 ZNF253O75346 499 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 PSMB3P49720 205 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 RAB2AP61019 212 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 KHDC3LQ587J8 217 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 AKR1C8PQ5T2L2 129 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 MORN5Q5VZ52 161 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 LCN15Q6UWW0 184 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 RPP25LQ8N5L8 163 aaKnown RBP11.65□□□□□ -0.54
CTTN-215ENST00000533931 FAM167A-AS1Q96KT0 104 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 HRH4Q9H3N8 390 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 AURKAIP1Q9NWT8 199 aaPredicted RBP11.65□□□□□ -0.54
CTTN-215ENST00000533931 CLEC5AQ9NY25 188 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 SMAD5-AS1Q9Y6J3 95 aa11.65□□□□□ -0.54
CTTN-215ENST00000533931 SOCS3O14543 225 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 ID1P41134 155 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 CDC34P49427 236 aaPredicted RBP11.64□□□□□ -0.55
CTTN-215ENST00000533931 CD81P60033 236 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
CTTN-215ENST00000533931 PDE6HQ13956 83 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 DPPA3Q6W0C5 159 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 PQLC2Q6ZP29 291 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 Q8N1Y9 231 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 GBGT1Q8N5D6 347 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 PHYHIPLQ96FC7 376 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 PRR25Q96S07 402 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 SLC25A2Q9BXI2 301 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 ACTR3CQ9C0K3 210 aaPredicted RBP11.64□□□□□ -0.55
CTTN-215ENST00000533931 RPRMQ9NS64 109 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 RFNGQ9Y644 331 aa11.64□□□□□ -0.55
CTTN-215ENST00000533931 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 TRAV5A0A0B4J249 113 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 A8MZ25 164 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 HIST1H1EP10412 219 aaKnown RBP11.63□□□□□ -0.55
CTTN-215ENST00000533931 RAB5CP51148 216 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 SPATA31B1PQ5VZV4 182 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 C17orf77Q96MU5 243 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 SLC50A1Q9BRV3 221 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 C19orf73Q9NVV2 129 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 SELENOKQ9Y6D0 94 aa11.63□□□□□ -0.55
CTTN-215ENST00000533931 IGKV3-7A0A075B6H7 116 aa11.62□□□□□ -0.55
CTTN-215ENST00000533931 OR11H12B2RN74 326 aa11.62□□□□□ -0.55
CTTN-215ENST00000533931 STAG3L2P0CL84 134 aa11.62□□□□□ -0.55
CTTN-215ENST00000533931 STAG3L3P0CL85 134 aa11.62□□□□□ -0.55
CTTN-215ENST00000533931 TFPI2P48307 235 aa11.62□□□□□ -0.55
CTTN-215ENST00000533931 ODF3L2Q3SX64 289 aa11.62□□□□□ -0.55
CTTN-215ENST00000533931 FAM122CQ6P4D5 195 aa11.62□□□□□ -0.55
CTTN-215ENST00000533931 OR51M1Q9H341 326 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms