RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 THYN1Q9P016 225 aa14.36□□□□□ -0.11
SMPD1-208ENST00000533123 TRBV9A0A0B4J1U6 114 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 IGLV1-40P01703 118 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 TRGC2P03986 189 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 PF4V1P10720 104 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 NPPCP23582 126 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 TAS2R45P59539 299 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 GFI1BQ5VTD9 330 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 LINC00305Q7Z4B0 112 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 OR5AU1Q8NGC0 362 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 F8W735 103 aaPredicted RBP14.35□□□□□ -0.11
SMPD1-208ENST00000533123 TRGV3P03979 118 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 HIST1H1BP16401 226 aaKnown RBP14.35□□□□□ -0.11
SMPD1-208ENST00000533123 HIST3H2BBQ8N257 126 aa14.35□□□□□ -0.11
SMPD1-208ENST00000533123 TMEM250H0YL14 139 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 LYZP61626 148 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 C15orf32Q32M92 178 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 PQLC2Q6ZP29 291 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 RNF2Q99496 336 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 GPR61Q9BZJ8 451 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 PARLQ9H300 379 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 IGHG4P01861 327 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 PYYP10082 97 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 TPPP2P59282 170 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 SLC35B1P78383 322 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 DEFA6Q01524 100 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 KLK9Q2XQG4 91 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 LINC01006Q8NI28 216 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 SMIM7Q9BQ49 75 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 C21orf62Q9NYP8 219 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 KLK9Q9UKQ9 250 aa14.34□□□□□ -0.11
SMPD1-208ENST00000533123 ELOA3CA0A087WX78 387 aaPredicted RBP14.33□□□□□ -0.12
SMPD1-208ENST00000533123 PPP1R2P9O14990 202 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 GNG7O60262 68 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 HYPMO75409 117 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 NECAP1Q8NC96 275 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 C16orf95Q9H693 158 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 SNRPCP09234 159 aaKnown RBP14.33□□□□□ -0.12
SMPD1-208ENST00000533123 PSMB8P28062 276 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 RAB9AP51151 201 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 Q56UQ5 140 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 LEMD1Q68G75 181 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 DERL1Q9BUN8 251 aa14.33□□□□□ -0.12
SMPD1-208ENST00000533123 ATRQ13535 2644 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 B4DEV8 164 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 H3BUA1 57 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 PDE6DO43924 150 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 MFAP4P55083 255 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 PLP1P60201 277 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 UBE2L3P68036 154 aaKnown RBP14.32□□□□□ -0.12
SMPD1-208ENST00000533123 PDZD11Q5EBL8 140 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 TEX38Q6PEX7 206 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 TMEM167BQ9NRX6 74 aa14.32□□□□□ -0.12
SMPD1-208ENST00000533123 SCO2A0A1W2PP80 73 aa14.31□□□□□ -0.12
SMPD1-208ENST00000533123 OR2T8A6NH00 312 aa14.31□□□□□ -0.12
SMPD1-208ENST00000533123 TRGC1P0CF51 173 aa14.31□□□□□ -0.12
SMPD1-208ENST00000533123 KLHDC1Q8N7A1 406 aa14.31□□□□□ -0.12
SMPD1-208ENST00000533123 FRZBQ92765 325 aa14.31□□□□□ -0.12
SMPD1-208ENST00000533123 NDUFB4O95168 129 aa14.31□□□□□ -0.12
SMPD1-208ENST00000533123 BRI3O95415 125 aa14.31□□□□□ -0.12
SMPD1-208ENST00000533123 FAM210BQ96KR6 192 aa14.31□□□□□ -0.12
SMPD1-208ENST00000533123 NDUFA7O95182 113 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 ATP5G2Q06055 141 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 DNLZQ5SXM8 178 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 C14orf144Q96I85 54 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 PAXXQ9BUH6 204 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 SDF2L1Q9HCN8 221 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 TMEM242Q9NWH2 141 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 FAM223BA6NKX1 122 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 PHOX2AO14813 284 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 TOMM40O96008 361 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 FAM223AQ8IWN6 122 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 HIGD1AQ9Y241 93 aa14.3□□□□□ -0.12
SMPD1-208ENST00000533123 GGTLC3B5MD39 225 aa14.29□□□□□ -0.12
SMPD1-208ENST00000533123 F6UZH7 168 aa14.29□□□□□ -0.12
SMPD1-208ENST00000533123 HAX1O00165 279 aa14.29□□□□□ -0.12
SMPD1-208ENST00000533123 RPLP1P05386 114 aaKnown RBP14.29□□□□□ -0.12
SMPD1-208ENST00000533123 VN1R17PQ8TDU5 208 aa14.29□□□□□ -0.12
SMPD1-208ENST00000533123 FXYD5Q96DB9 178 aa14.29□□□□□ -0.12
SMPD1-208ENST00000533123 IGHV3-11P01762 117 aa14.29□□□□□ -0.12
SMPD1-208ENST00000533123 IL4P05112 153 aa14.29□□□□□ -0.12
SMPD1-208ENST00000533123 PNRC1Q12796 327 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-208ENST00000533123 FOXE3Q13461 319 aa14.29□□□□□ -0.12
SMPD1-208ENST00000533123 TRAV30A0A087WSZ9 112 aa14.28□□□□□ -0.12
SMPD1-208ENST00000533123 ELANEP08246 267 aa14.28□□□□□ -0.12
SMPD1-208ENST00000533123 FABP4P15090 132 aa14.28□□□□□ -0.12
SMPD1-208ENST00000533123 ZNF491Q8N8L2 437 aa14.28□□□□□ -0.12
SMPD1-208ENST00000533123 ZNF502Q8TBZ5 544 aa14.28□□□□□ -0.12
SMPD1-208ENST00000533123 TXNDC17Q9BRA2 123 aa14.28□□□□□ -0.12
SMPD1-208ENST00000533123 SLC25A39Q9BZJ4 359 aaPredicted RBP14.28□□□□□ -0.12
SMPD1-208ENST00000533123 NAT8Q9UHE5 227 aa14.28□□□□□ -0.12
SMPD1-208ENST00000533123 RNF114Q9Y508 228 aa14.28□□□□□ -0.12
SMPD1-208ENST00000533123 TMEM89A2RUT3 159 aa14.27□□□□□ -0.12
SMPD1-208ENST00000533123 CTSGP08311 255 aa14.27□□□□□ -0.12
SMPD1-208ENST00000533123 YPEL3P61236 119 aaPredicted RBP14.27□□□□□ -0.12
SMPD1-208ENST00000533123 TMEM241Q24JQ0 296 aa14.27□□□□□ -0.12
SMPD1-208ENST00000533123 HIST2H2BDQ6DRA6 164 aa14.27□□□□□ -0.12
SMPD1-208ENST00000533123 EEF1AKMT3Q96AZ1 226 aa14.27□□□□□ -0.12
SMPD1-208ENST00000533123 RNF125Q96EQ8 232 aa14.27□□□□□ -0.12
SMPD1-208ENST00000533123 USMG5Q96IX5 58 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms