RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 GGACTQ9BVM4 153 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 ZNF98A6NK75 572 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 CXCL2P19875 107 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 PVALBP20472 110 aaPredicted RBP11.26□□□□□ -0.61
CPSF1-210ENST00000532935 S100A7P31151 101 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 CAV2P51636 162 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 SELENOTP62341 195 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 IFITM2Q01629 132 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 RAB32Q13637 225 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 TMUB2Q71RG4 321 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 ZNF767PQ75MW2 155 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 GATAD1Q8WUU5 269 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 SLC25A32Q9H2D1 315 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 SLC25A22Q9H936 323 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 DOK5Q9P104 306 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 MBD2Q9UBB5 411 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
CPSF1-210ENST00000532935 PLECQ15149 4684 aaKnown RBP11.26□□□□□ -0.61
CPSF1-210ENST00000532935 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 FAM24AA6NFZ4 105 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 E5RGE8 158 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 LINC00869P0C866 280 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 PLP1P60201 277 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 SLC38A11Q08AI6 406 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 OPCMLQ14982 345 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 LRRC37A5PQ49AS3 106 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
CPSF1-210ENST00000532935 LYRM2Q9NU23 88 aaPredicted RBP11.25□□□□□ -0.61
CPSF1-210ENST00000532935 H0YIZ8 118 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 SOCS3O14543 225 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 HYPMO75409 117 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 CST7O76096 145 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 SPP1P10451 314 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 ID1P41134 155 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 GALR1P47211 349 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 PSMB3P49720 205 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
CPSF1-210ENST00000532935 LINC00052Q96N35 136 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 SCRT1Q9BWW7 348 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
CPSF1-210ENST00000532935 HIGD1AQ9Y241 93 aa11.24□□□□□ -0.61
CPSF1-210ENST00000532935 RNF222A6NCQ9 220 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 H3BRN7 92 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 TAAR5O14804 337 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 AGPAT2O15120 278 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
CPSF1-210ENST00000532935 OR5G3P0C626 314 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 TMEM41BQ5BJD5 291 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 SLC51BQ86UW2 128 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 TMEM217Q8N7C4 229 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 GPR82Q96P67 336 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 RARRES2Q99969 163 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 ARL6Q9H0F7 186 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 RYR2Q92736 4967 aa11.23□□□□□ -0.61
CPSF1-210ENST00000532935 KANTRA0A1W2PQU2 76 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 IGSF23A1L1A6 192 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 H3BMM0 161 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 ISLRO14498 428 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 IFNA7P01567 189 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 MEOX2P50222 304 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 SULT1A1P50225 295 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 EWSR1Q01844 656 aaKnown RBP eCLIP11.22□□□□□ -0.61
CPSF1-210ENST00000532935 NDUFA5Q16718 116 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 SAMD13Q5VXD3 122 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 TEX261Q6UWH6 196 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 TMEM252Q8N6L7 170 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 C17orf77Q96MU5 243 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 MGST2Q99735 147 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
CPSF1-210ENST00000532935 BCL2L11O43521 198 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 EIF5AP63241 154 aaKnown RBP11.21□□□□□ -0.61
CPSF1-210ENST00000532935 PXDC1Q5TGL8 231 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 PATE2Q6UY27 113 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 S100A7AQ86SG5 101 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 STX12Q86Y82 276 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 C16orf92Q96LL3 132 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 UHRF2Q96PU4 802 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 ARPC5LQ9BPX5 153 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.61
CPSF1-210ENST00000532935 RPL7P18124 248 aaKnown RBP11.2□□□□□ -0.62
CPSF1-210ENST00000532935 ATF4P18848 351 aaPredicted RBP11.2□□□□□ -0.62
CPSF1-210ENST00000532935 DEFB1P60022 68 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 HBG1P69891 147 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 HBG2P69892 147 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 RAB31Q13636 194 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 SLC25A31Q9H0C2 315 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 ARV1Q9H2C2 271 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 SAV1Q9H4B6 383 aaPredicted RBP11.2□□□□□ -0.62
CPSF1-210ENST00000532935 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
CPSF1-210ENST00000532935 RPL12P30050 165 aaKnown RBP11.19□□□□□ -0.62
CPSF1-210ENST00000532935 CAMLGP49069 296 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms