RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 LINC00322Q6ZN03 302 aaPredicted RBP18.42■□□□□ 0.54
USP48-214ENST00000532737 APRG1Q8IVJ8 170 aa18.42■□□□□ 0.54
USP48-214ENST00000532737 SBSPONQ8IVN8 264 aa18.42■□□□□ 0.54
USP48-214ENST00000532737 DNAH9Q9NYC9 4486 aa18.42■□□□□ 0.54
USP48-214ENST00000532737 RNF222A6NCQ9 220 aa18.41■□□□□ 0.54
USP48-214ENST00000532737 DEFB131AP59861 70 aa18.41■□□□□ 0.54
USP48-214ENST00000532737 C10orf113Q5VZT2 155 aa18.41■□□□□ 0.54
USP48-214ENST00000532737 LINC00305Q7Z4B0 112 aa18.41■□□□□ 0.54
USP48-214ENST00000532737 S100A7AQ86SG5 101 aa18.41■□□□□ 0.54
USP48-214ENST00000532737 ZNF709Q8N972 641 aa18.41■□□□□ 0.54
USP48-214ENST00000532737 INO80EQ8NBZ0 244 aaPredicted RBP18.41■□□□□ 0.54
USP48-214ENST00000532737 C17orf77Q96MU5 243 aa18.41■□□□□ 0.54
USP48-214ENST00000532737 ZNF688P0C7X2 276 aa18.4■□□□□ 0.54
USP48-214ENST00000532737 GALR1P47211 349 aa18.4■□□□□ 0.54
USP48-214ENST00000532737 MORN5Q5VZ52 161 aa18.4■□□□□ 0.54
USP48-214ENST00000532737 OR1L4Q8NGR5 311 aa18.4■□□□□ 0.54
USP48-214ENST00000532737 SCGB1C1Q8TD33 95 aa18.4■□□□□ 0.54
USP48-214ENST00000532737 GPR82Q96P67 336 aa18.4■□□□□ 0.54
USP48-214ENST00000532737 RSG1Q9BU20 258 aa18.4■□□□□ 0.54
USP48-214ENST00000532737 GCSAMLQ5JQS6 135 aa18.39■□□□□ 0.53
USP48-214ENST00000532737 PARD6GQ9BYG4 376 aaPredicted RBP18.39■□□□□ 0.53
USP48-214ENST00000532737 RPL7P18124 248 aaKnown RBP18.38■□□□□ 0.53
USP48-214ENST00000532737 PFDN5Q99471 154 aa18.38■□□□□ 0.53
USP48-214ENST00000532737 C17orf112F2Z3M2 114 aa18.37■□□□□ 0.53
USP48-214ENST00000532737 SOCS3O14543 225 aa18.37■□□□□ 0.53
USP48-214ENST00000532737 KCNIP2Q9NS61 270 aa18.37■□□□□ 0.53
USP48-214ENST00000532737 RFNGQ9Y644 331 aa18.37■□□□□ 0.53
USP48-214ENST00000532737 TRAV5A0A0B4J249 113 aa18.36■□□□□ 0.53
USP48-214ENST00000532737 MRPS12O15235 138 aaKnown RBP18.36■□□□□ 0.53
USP48-214ENST00000532737 ARPC5O15511 151 aa18.36■□□□□ 0.53
USP48-214ENST00000532737 HAGHQ16775 308 aa18.36■□□□□ 0.53
USP48-214ENST00000532737 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.36■□□□□ 0.53
USP48-214ENST00000532737 KMT2CQ8NEZ4 4911 aaKnown RBP18.36■□□□□ 0.53
USP48-214ENST00000532737 GATAD1Q8WUU5 269 aa18.36■□□□□ 0.53
USP48-214ENST00000532737 SEPSECSQ9HD40 501 aaKnown RBP18.36■□□□□ 0.53
USP48-214ENST00000532737 RNF24Q9Y225 148 aa18.36■□□□□ 0.53
USP48-214ENST00000532737 hCG_2014768A0A024R1R8 64 aa18.35■□□□□ 0.53
USP48-214ENST00000532737 PSMG4Q5JS54 123 aa18.35■□□□□ 0.53
USP48-214ENST00000532737 OR11H4Q8NGC9 324 aa18.35■□□□□ 0.53
USP48-214ENST00000532737 ST6GAL2Q96JF0 529 aa18.35■□□□□ 0.53
USP48-214ENST00000532737 LOC102724200A0A096LPH7 203 aaPredicted RBP18.34■□□□□ 0.53
USP48-214ENST00000532737 SNRPD3P62318 126 aaKnown RBP18.34■□□□□ 0.53
USP48-214ENST00000532737 NHLRC4P0CG21 123 aaPredicted RBP18.33■□□□□ 0.52
USP48-214ENST00000532737 ATF4P18848 351 aaPredicted RBP18.33■□□□□ 0.52
USP48-214ENST00000532737 MEOX2P50222 304 aa18.33■□□□□ 0.52
USP48-214ENST00000532737 ZNF266Q14584 549 aa18.33■□□□□ 0.52
USP48-214ENST00000532737 FFAR4Q5NUL3 377 aa18.33■□□□□ 0.52
USP48-214ENST00000532737 MFFQ9GZY8 342 aa18.33■□□□□ 0.52
USP48-214ENST00000532737 ISLRO14498 428 aa18.32■□□□□ 0.52
USP48-214ENST00000532737 RPL35AP18077 110 aaKnown RBP18.32■□□□□ 0.52
USP48-214ENST00000532737 ID1P41134 155 aa18.32■□□□□ 0.52
USP48-214ENST00000532737 PSMB3P49720 205 aa18.32■□□□□ 0.52
USP48-214ENST00000532737 SPATA31B1PQ5VZV4 182 aa18.32■□□□□ 0.52
USP48-214ENST00000532737 LINC00052Q96N35 136 aa18.32■□□□□ 0.52
USP48-214ENST00000532737 TENM3Q9P273 2699 aa18.31■□□□□ 0.52
USP48-214ENST00000532737 A0A087X0K7 114 aa18.31■□□□□ 0.52
USP48-214ENST00000532737 KNCNA6PVL3 124 aa18.31■□□□□ 0.52
USP48-214ENST00000532737 FAM78BQ5VT40 261 aa18.31■□□□□ 0.52
USP48-214ENST00000532737 RPL7L1Q6DKI1 246 aaKnown RBP18.31■□□□□ 0.52
USP48-214ENST00000532737 BPIFA4PQ86YQ2 179 aa18.31■□□□□ 0.52
USP48-214ENST00000532737 HSD17B11Q8NBQ5 300 aa18.31■□□□□ 0.52
USP48-214ENST00000532737 C16orf92Q96LL3 132 aa18.31■□□□□ 0.52
USP48-214ENST00000532737 TIMM9Q9Y5J7 89 aa18.31■□□□□ 0.52
USP48-214ENST00000532737 SNRPCP09234 159 aaKnown RBP18.3■□□□□ 0.52
USP48-214ENST00000532737 SAMD13Q5VXD3 122 aa18.3■□□□□ 0.52
USP48-214ENST00000532737 MIR17HGQ75NE6 70 aa18.3■□□□□ 0.52
USP48-214ENST00000532737 TM2D3Q9BRN9 247 aa18.3■□□□□ 0.52
USP48-214ENST00000532737 TRAV8-2A0A0B4J237 113 aa18.29■□□□□ 0.52
USP48-214ENST00000532737 HMSDA8MTL9 139 aa18.29■□□□□ 0.52
USP48-214ENST00000532737 DEFB1P60022 68 aa18.29■□□□□ 0.52
USP48-214ENST00000532737 ACTL10Q5JWF8 245 aa18.29■□□□□ 0.52
USP48-214ENST00000532737 IGFL4Q6B9Z1 124 aa18.29■□□□□ 0.52
USP48-214ENST00000532737 C20orf173Q96LM9 149 aa18.29■□□□□ 0.52
USP48-214ENST00000532737 A0A1B0GVG6 124 aa18.28■□□□□ 0.52
USP48-214ENST00000532737 H3BQ15 152 aa18.28■□□□□ 0.52
USP48-214ENST00000532737 IGLC2P0DOY2 106 aa18.28■□□□□ 0.52
USP48-214ENST00000532737 ATP6V0CP27449 155 aa18.28■□□□□ 0.52
USP48-214ENST00000532737 FAM167A-AS1Q96KT0 104 aa18.28■□□□□ 0.52
USP48-214ENST00000532737 BORCS7-ASMTA0A0B4J1R7 106 aa18.27■□□□□ 0.52
USP48-214ENST00000532737 H3BTX0 84 aa18.27■□□□□ 0.52
USP48-214ENST00000532737 TCTE3Q8IZS6 198 aa18.27■□□□□ 0.52
USP48-214ENST00000532737 KCNRGQ8N5I3 272 aa18.27■□□□□ 0.52
USP48-214ENST00000532737 SLC25A2Q9BXI2 301 aa18.27■□□□□ 0.52
USP48-214ENST00000532737 CYTL1Q9NRR1 136 aa18.27■□□□□ 0.52
USP48-214ENST00000532737 FUT9Q9Y231 359 aa18.27■□□□□ 0.52
USP48-214ENST00000532737 CXCL2P19875 107 aa18.26■□□□□ 0.51
USP48-214ENST00000532737 APOC4P55056 127 aa18.26■□□□□ 0.51
USP48-214ENST00000532737 STHQ8IWL8 128 aa18.26■□□□□ 0.51
USP48-214ENST00000532737 RNF182Q8N6D2 247 aa18.26■□□□□ 0.51
USP48-214ENST00000532737 MRPL32Q9BYC8 188 aaKnown RBP18.26■□□□□ 0.51
USP48-214ENST00000532737 SH3BGRL3Q9H299 93 aa18.26■□□□□ 0.51
USP48-214ENST00000532737 HRH4Q9H3N8 390 aa18.26■□□□□ 0.51
USP48-214ENST00000532737 TMEM14CQ9P0S9 112 aa18.26■□□□□ 0.51
USP48-214ENST00000532737 HUWE1Q7Z6Z7 4374 aaKnown RBP18.26■□□□□ 0.51
USP48-214ENST00000532737 KIR2DL5BA0A0G2JN68 375 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 KIR2DL5BA0A0G2JPC4 375 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 TAAR5O14804 337 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 RAB2AP61019 212 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 ZNF345Q14585 488 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 GDF5OSQ5U4N7 250 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms