RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 LYL1P12980 280 aa14.61□□□□□ -0.07
CPSF1-209ENST00000532725 GALR1P47211 349 aa14.61□□□□□ -0.07
CPSF1-209ENST00000532725 RPL29P47914 159 aaKnown RBP14.61□□□□□ -0.07
CPSF1-209ENST00000532725 MIC13Q5XKP0 118 aa14.61□□□□□ -0.07
CPSF1-209ENST00000532725 Q6ZWC4 215 aa14.61□□□□□ -0.07
CPSF1-209ENST00000532725 MBD2Q9UBB5 411 aa14.61□□□□□ -0.07
CPSF1-209ENST00000532725 AGRNO00468 2067 aa14.61□□□□□ -0.07
CPSF1-209ENST00000532725 KNCNA6PVL3 124 aa14.6□□□□□ -0.07
CPSF1-209ENST00000532725 S100A7AQ86SG5 101 aa14.6□□□□□ -0.07
CPSF1-209ENST00000532725 DNAJC4Q9NNZ3 241 aa14.6□□□□□ -0.07
CPSF1-209ENST00000532725 ELOA3CA0A087WX78 387 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-209ENST00000532725 MPDU1O75352 247 aa14.59□□□□□ -0.07
CPSF1-209ENST00000532725 FGF7P21781 194 aa14.59□□□□□ -0.07
CPSF1-209ENST00000532725 RPL12P30050 165 aaKnown RBP14.59□□□□□ -0.07
CPSF1-209ENST00000532725 ID1P41134 155 aa14.59□□□□□ -0.07
CPSF1-209ENST00000532725 OPCMLQ14982 345 aa14.59□□□□□ -0.07
CPSF1-209ENST00000532725 Q6ZRG5 221 aa14.59□□□□□ -0.07
CPSF1-209ENST00000532725 LINC00305Q7Z4B0 112 aa14.59□□□□□ -0.07
CPSF1-209ENST00000532725 STHQ8IWL8 128 aa14.59□□□□□ -0.07
CPSF1-209ENST00000532725 EDA2RQ9HAV5 297 aa14.59□□□□□ -0.07
CPSF1-209ENST00000532725 RPL7P18124 248 aaKnown RBP14.58□□□□□ -0.08
CPSF1-209ENST00000532725 PSMB3P49720 205 aa14.58□□□□□ -0.08
CPSF1-209ENST00000532725 CLINT1Q14677 625 aa14.58□□□□□ -0.08
CPSF1-209ENST00000532725 ACTL10Q5JWF8 245 aa14.58□□□□□ -0.08
CPSF1-209ENST00000532725 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.58□□□□□ -0.08
CPSF1-209ENST00000532725 TRPT1Q86TN4 253 aaKnown RBP14.58□□□□□ -0.08
CPSF1-209ENST00000532725 RNF183Q96D59 192 aa14.58□□□□□ -0.08
CPSF1-209ENST00000532725 SLC39A9Q9NUM3 307 aa14.58□□□□□ -0.08
CPSF1-209ENST00000532725 TP53TG1Q9Y2A0 90 aa14.58□□□□□ -0.08
CPSF1-209ENST00000532725 HSPB11Q9Y547 144 aa14.58□□□□□ -0.08
CPSF1-209ENST00000532725 ISLRO14498 428 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 MRPS12O15235 138 aaKnown RBP14.57□□□□□ -0.08
CPSF1-209ENST00000532725 SPRY2O43597 315 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 COX7A2P2O60397 106 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 MEOX2P50222 304 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 C10orf113Q5VZT2 155 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 THAP6Q8TBB0 222 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 LINC00052Q96N35 136 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 NPCDR1Q9BY65 106 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 RNF24Q9Y225 148 aa14.57□□□□□ -0.08
CPSF1-209ENST00000532725 B2MP61769 119 aa14.56□□□□□ -0.08
CPSF1-209ENST00000532725 DEFB135Q30KP9 77 aa14.56□□□□□ -0.08
CPSF1-209ENST00000532725 Q5BKY6 102 aa14.56□□□□□ -0.08
CPSF1-209ENST00000532725 SAMD13Q5VXD3 122 aa14.56□□□□□ -0.08
CPSF1-209ENST00000532725 MORN5Q5VZ52 161 aa14.56□□□□□ -0.08
CPSF1-209ENST00000532725 C16orf92Q96LL3 132 aa14.56□□□□□ -0.08
CPSF1-209ENST00000532725 WDR61Q9GZS3 305 aaKnown RBP14.56□□□□□ -0.08
CPSF1-209ENST00000532725 PXMP4Q9Y6I8 212 aa14.56□□□□□ -0.08
CPSF1-209ENST00000532725 H3BMM0 161 aa14.55□□□□□ -0.08
CPSF1-209ENST00000532725 GIG44P09565 113 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-209ENST00000532725 GIPP09681 153 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-209ENST00000532725 OR1L4Q8NGR5 311 aa14.55□□□□□ -0.08
CPSF1-209ENST00000532725 ASB13Q8WXK3 278 aa14.55□□□□□ -0.08
CPSF1-209ENST00000532725 C20orf173Q96LM9 149 aa14.55□□□□□ -0.08
CPSF1-209ENST00000532725 ATP5SQ99766 215 aa14.55□□□□□ -0.08
CPSF1-209ENST00000532725 TRAV8-2A0A0B4J237 113 aa14.54□□□□□ -0.08
CPSF1-209ENST00000532725 ATF4P18848 351 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-209ENST00000532725 DEFB1P60022 68 aa14.54□□□□□ -0.08
CPSF1-209ENST00000532725 PFDN5Q99471 154 aa14.54□□□□□ -0.08
CPSF1-209ENST00000532725 A0A087X0K7 114 aa14.53□□□□□ -0.08
CPSF1-209ENST00000532725 TRAV5A0A0B4J249 113 aa14.53□□□□□ -0.08
CPSF1-209ENST00000532725 FGL1Q08830 312 aa14.53□□□□□ -0.08
CPSF1-209ENST00000532725 GDF5OSQ5U4N7 250 aa14.53□□□□□ -0.08
CPSF1-209ENST00000532725 MORN3Q6PF18 240 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-209ENST00000532725 GATAD1Q8WUU5 269 aa14.53□□□□□ -0.08
CPSF1-209ENST00000532725 SMIM3Q9BZL3 60 aa14.53□□□□□ -0.08
CPSF1-209ENST00000532725 SAV1Q9H4B6 383 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-209ENST00000532725 WFDC1Q9HC57 220 aa14.53□□□□□ -0.08
CPSF1-209ENST00000532725 CA1P00915 261 aaPredicted RBP14.52□□□□□ -0.09
CPSF1-209ENST00000532725 SPP1P10451 314 aa14.52□□□□□ -0.09
CPSF1-209ENST00000532725 HLA-DRB4P13762 266 aa14.52□□□□□ -0.09
CPSF1-209ENST00000532725 IGFL4Q6B9Z1 124 aa14.52□□□□□ -0.09
CPSF1-209ENST00000532725 FOXI2Q6ZQN5 318 aa14.52□□□□□ -0.09
CPSF1-209ENST00000532725 BPIFA4PQ86YQ2 179 aa14.52□□□□□ -0.09
CPSF1-209ENST00000532725 HLA-DRB4X5D2U9 266 aa14.52□□□□□ -0.09
CPSF1-209ENST00000532725 GCSAMLQ5JQS6 135 aa14.51□□□□□ -0.09
CPSF1-209ENST00000532725 RPRMQ9NS64 109 aa14.51□□□□□ -0.09
CPSF1-209ENST00000532725 DNAH7Q8WXX0 4024 aa14.5□□□□□ -0.09
CPSF1-209ENST00000532725 F6UB75 175 aa14.5□□□□□ -0.09
CPSF1-209ENST00000532725 ZNF709Q8N972 641 aa14.5□□□□□ -0.09
CPSF1-209ENST00000532725 MUC7Q8TAX7 377 aa14.5□□□□□ -0.09
CPSF1-209ENST00000532725 CLUHP3Q96NS8 147 aa14.5□□□□□ -0.09
CPSF1-209ENST00000532725 PARD6GQ9BYG4 376 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-209ENST00000532725 A0A0J9YX75 114 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 IFNA5P01569 189 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 IGLC2P0DOY2 106 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 C4BPBP20851 252 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 TMEM41BQ5BJD5 291 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 SPATA31B1PQ5VZV4 182 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 RNF182Q8N6D2 247 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 CSNK1G2-AS1Q8NCQ2 148 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 SCGB1C1Q8TD33 95 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 AQP10Q96PS8 301 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 HRH4Q9H3N8 390 aa14.49□□□□□ -0.09
CPSF1-209ENST00000532725 C17orf112F2Z3M2 114 aa14.48□□□□□ -0.09
CPSF1-209ENST00000532725 C3orf84H3BNL1 204 aa14.48□□□□□ -0.09
CPSF1-209ENST00000532725 H3BQ15 152 aa14.48□□□□□ -0.09
CPSF1-209ENST00000532725 SNRPCP09234 159 aaKnown RBP14.48□□□□□ -0.09
CPSF1-209ENST00000532725 CXCL2P19875 107 aa14.48□□□□□ -0.09
CPSF1-209ENST00000532725 EBLN2Q6P2I7 272 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms