RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SLC25A39Q9BZJ4 359 aaPredicted RBP9.47□□□□□ -0.89
COPB1-208ENST00000532088 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 TRAV25A0A0B4J276 109 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 UMAD1C9J7I0 102 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 BOLA2-SMG1P6H3BVE0 249 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 PAX4O43316 350 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 IGLV1-51P01701 117 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 C16orf54Q6UWD8 224 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 PATE2Q6UY27 113 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 GLMPQ8WWB7 406 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 ST8SIA2Q92186 375 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 PHYHIPLQ96FC7 376 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 X6R8D5 127 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 TRRAPQ9Y4A5 3859 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 DNHD1Q96M86 4753 aa9.46□□□□□ -0.9
COPB1-208ENST00000532088 HELTA6NFD8 242 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 ZNF98A6NK75 572 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 ZNF207O43670 478 aaKnown RBP9.45□□□□□ -0.9
COPB1-208ENST00000532088 SAP30O75446 220 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 DEFB114Q30KQ6 69 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 FAM90A2PQ658T7 463 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 LINC00305Q7Z4B0 112 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 SH3BGRL3Q9H299 93 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 CDIP1Q9H305 208 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 DOK5Q9P104 306 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 ZMAT5Q9UDW3 170 aaKnown RBP9.45□□□□□ -0.9
COPB1-208ENST00000532088 MLXQ9UH92 298 aa9.45□□□□□ -0.9
COPB1-208ENST00000532088 APOHP02749 345 aaPredicted RBP9.44□□□□□ -0.9
COPB1-208ENST00000532088 RPL7P18124 248 aaKnown RBP9.44□□□□□ -0.9
COPB1-208ENST00000532088 MEOX2P50222 304 aa9.44□□□□□ -0.9
COPB1-208ENST00000532088 RAB5CP51148 216 aa9.44□□□□□ -0.9
COPB1-208ENST00000532088 RHOBP62745 196 aa9.44□□□□□ -0.9
COPB1-208ENST00000532088 TMEM41BQ5BJD5 291 aa9.44□□□□□ -0.9
COPB1-208ENST00000532088 AKR1C8PQ5T2L2 129 aa9.44□□□□□ -0.9
COPB1-208ENST00000532088 DPPA3Q6W0C5 159 aa9.44□□□□□ -0.9
COPB1-208ENST00000532088 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
COPB1-208ENST00000532088 TRAV2A0A0B4J234 112 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 TSPAN4O14817 238 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 EDN2P20800 178 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 TAS2R45P59539 299 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 GCSAMLQ5JQS6 135 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 FAM78BQ5VT40 261 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 SAMD13Q5VXD3 122 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 LCN12Q6JVE5 192 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 OR8I2Q8N0Y5 310 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 STXBP6Q8NFX7 210 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 OR10G4Q8NGN3 311 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 OR10G9Q8NGN4 311 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 UHRF2Q96PU4 802 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 SCRT1Q9BWW7 348 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 SEPSECSQ9HD40 501 aaKnown RBP9.43□□□□□ -0.9
COPB1-208ENST00000532088 TMEM14CQ9P0S9 112 aa9.43□□□□□ -0.9
COPB1-208ENST00000532088 CMYA5Q8N3K9 4069 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 WNK1Q9H4A3 2382 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 A0A1W2PPV4 95 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 IGLL1P15814 213 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 GALR1P47211 349 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 RAB2AP61019 212 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 TCF24Q7RTU0 167 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 RPP25LQ8N5L8 163 aaKnown RBP9.42□□□□□ -0.9
COPB1-208ENST00000532088 SPAG8Q99932 426 aaPredicted RBP9.42□□□□□ -0.9
COPB1-208ENST00000532088 ACTR3CQ9C0K3 210 aaPredicted RBP9.42□□□□□ -0.9
COPB1-208ENST00000532088 RPRMQ9NS64 109 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 RFNGQ9Y644 331 aa9.42□□□□□ -0.9
COPB1-208ENST00000532088 A0A087X0K7 114 aa9.41□□□□□ -0.9
COPB1-208ENST00000532088 IGHV3-49A0A0A0MS15 119 aa9.41□□□□□ -0.9
COPB1-208ENST00000532088 MRPS12O15235 138 aaKnown RBP9.41□□□□□ -0.9
COPB1-208ENST00000532088 CDC34P49427 236 aaPredicted RBP9.41□□□□□ -0.9
COPB1-208ENST00000532088 PAFAH1B2P68402 229 aa9.41□□□□□ -0.9
COPB1-208ENST00000532088 EGFEM1PQ0D2K5 195 aa9.41□□□□□ -0.9
COPB1-208ENST00000532088 CD300EQ496F6 205 aaPredicted RBP9.41□□□□□ -0.9
COPB1-208ENST00000532088 KHDC3LQ587J8 217 aa9.41□□□□□ -0.9
COPB1-208ENST00000532088 PQLC2Q6ZP29 291 aa9.41□□□□□ -0.9
COPB1-208ENST00000532088 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
COPB1-208ENST00000532088 TMED6Q8WW62 240 aa9.41□□□□□ -0.9
COPB1-208ENST00000532088 IGHV3OR16-13A0A075B7E8 117 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 IGHV3-74A0A0B4J1X5 117 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 IGHV3-66A0A0C4DH42 116 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 CTXND1A0A1B0GTU2 59 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 STAG3L2P0CL84 134 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 STAG3L3P0CL85 134 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 SULT1A2P50226 295 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 GUK1Q16774 197 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 MORN5Q5VZ52 161 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 MIR17HGQ75NE6 70 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 TMEM61Q8N0U2 210 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 FAM167A-AS1Q96KT0 104 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 SLC25A2Q9BXI2 301 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 SLC25A22Q9H936 323 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 NRN1Q9NPD7 142 aa9.4□□□□□ -0.9
COPB1-208ENST00000532088 OR4C46A6NHA9 309 aa9.39□□□□□ -0.91
COPB1-208ENST00000532088 ZNF253O75346 499 aa9.39□□□□□ -0.91
COPB1-208ENST00000532088 GP9P14770 177 aa9.39□□□□□ -0.91
COPB1-208ENST00000532088 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
COPB1-208ENST00000532088 SPATA31B1PQ5VZV4 182 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms