RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 S100A16Q96FQ6 103 aaKnown RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ABHD14BQ96IU4 210 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 YPEL2Q96QA6 119 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 PMCHL2Q9BQD1 86 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 GABARAPL3Q9BY60 117 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 AGPAT4-IT1Q9H0P7 198 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 SMDT1Q9H4I9 107 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 PLEKHF2Q9H8W4 249 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 C21orf62Q9NYP8 219 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 SLC25A15Q9Y619 301 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 HLA-DRB4X5D2U9 266 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 TRPM3Q9HCF6 1732 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 SIPA1L1O43166 1804 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 CAMTA1Q9Y6Y1 1673 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 IGHV1OR15-1A0A075B7D0 117 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 TRGV5A0A0B4J1U4 118 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 IGHV6-1A0A0B4J1U7 121 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 TRAV41A0A0B4J266 112 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 TMEM235A6NFC5 223 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 MCRIP1C9JLW8 97 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 C9JQL5 133 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF73O43830 326 aaPredicted RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 HYPMO75409 117 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 IGHV3-23P01764 117 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 MT-ATP8P03928 68 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 SRP19P09132 144 aaKnown RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 ADCYAP1P18509 176 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 VDAC1P21796 283 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 INSL3P51460 131 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 SYNJ2BPP57105 145 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 YPEL3P61236 119 aaPredicted RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 HERVK_113P61574 105 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 NPC2P61916 151 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 EIF4EBP1Q13541 118 aaPredicted RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 LGALS9BQ3B8N2 356 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 TMEM155Q4W5P6 130 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 DPPA3Q6W0C5 159 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 TEN1Q86WV5 123 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 LINC00471Q8N535 108 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 RBMXL1Q96E39 390 aaKnown RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 C18orf15Q96N68 181 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 SHANK2-AS3Q9BTD1 123 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 RNF126Q9BV68 326 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 PARP12Q9H0J9 701 aaKnown RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 Q9H3A6 140 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 TXNL4BQ9NX01 149 aaKnown RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 NDUFB11Q9NX14 153 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 SPCS1Q9Y6A9 102 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 TARBP1Q13395 1621 aaKnown RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 HECW1Q76N89 1606 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 RNF17Q9BXT8 1623 aaKnown RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 SBF1O95248 1867 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 ARAP3Q8WWN8 1544 aa2.26□□□□□ -2.05
PTPRK-220ENST00000531466 RBBP6Q7Z6E9 1792 aaKnown RBP2.26□□□□□ -2.05
PTPRK-220ENST00000531466 THSD7AQ9UPZ6 1657 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 DICER1Q9UPY3 1922 aaKnown RBP2.25□□□□□ -2.05
PTPRK-220ENST00000531466 LAMC1P11047 1609 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 PTPN23Q9H3S7 1636 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 ABCA8O94911 1581 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 CFAP74Q9C0B2 1584 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 A0A0J9YW62 118 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 A0A1B0GW54 56 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 C7orf77A4D0Y5 90 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 A8MUN3 132 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 C4orf51C9J302 202 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 H3BT86 120 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 SYNGR2O43760 224 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 SIX6O95475 246 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 SOD1P00441 154 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 IGLV3-27P01718 113 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 CD3DP04234 171 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 TCRAP04437 139 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 SLC25A5P05141 298 aaKnown RBP2.25□□□□□ -2.05
PTPRK-220ENST00000531466 SLC25A6P12236 298 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 TPT1P13693 172 aaKnown RBP2.25□□□□□ -2.05
PTPRK-220ENST00000531466 CRISP2P16562 243 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 NFYAP23511 347 aaPredicted RBP2.25□□□□□ -2.05
PTPRK-220ENST00000531466 HINT1P49773 126 aaPredicted RBP2.25□□□□□ -2.05
PTPRK-220ENST00000531466 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 HBBP68871 147 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 CDK5R1Q15078 307 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 TDRG1Q3Y452 100 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 SPRNQ5BIV9 151 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 C1orf100Q5SVJ3 147 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF678Q5SXM1 525 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 UNQ9165/PRO28630Q6UXU0 137 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 TMEM91Q6ZNR0 172 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 FAM19A3Q7Z5A8 133 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 RPP25LQ8N5L8 163 aaKnown RBP2.25□□□□□ -2.05
PTPRK-220ENST00000531466 LINC00311Q8N616 119 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 NKAPP1Q8N9T2 125 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 C15orf53Q8NAA6 179 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 OR10G2Q8NGC3 310 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 OR10AG1Q8NH19 301 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 FAM57AQ8TBR7 257 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 PRELID3AQ96N28 172 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 SMIM14Q96QK8 99 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 TIMM17AQ99595 171 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 HDHD3Q9BSH5 251 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms