RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 GCSAMLQ5JQS6 135 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 MORN5Q5VZ52 161 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 AKAP14Q86UN6 197 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 DCANP1Q8TF63 244 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 TUBA4BQ9H853 241 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 SRD5A3Q9H8P0 318 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 MAP6D1Q9H9H5 199 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 C19orf73Q9NVV2 129 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 RFNGQ9Y644 331 aa10.31□□□□□ -0.76
SMPD1-206ENST00000531336 ZNF688P0C7X2 276 aa10.3□□□□□ -0.76
SMPD1-206ENST00000531336 RPL7P18124 248 aaKnown RBP10.3□□□□□ -0.76
SMPD1-206ENST00000531336 ATF4P18848 351 aaPredicted RBP10.3□□□□□ -0.76
SMPD1-206ENST00000531336 FFAR4Q5NUL3 377 aa10.3□□□□□ -0.76
SMPD1-206ENST00000531336 TCTE3Q8IZS6 198 aa10.3□□□□□ -0.76
SMPD1-206ENST00000531336 HSD17B11Q8NBQ5 300 aa10.3□□□□□ -0.76
SMPD1-206ENST00000531336 GPR82Q96P67 336 aa10.3□□□□□ -0.76
SMPD1-206ENST00000531336 BORCS7-ASMTA0A0B4J1R7 106 aa10.29□□□□□ -0.76
SMPD1-206ENST00000531336 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
SMPD1-206ENST00000531336 DEFB131AP59861 70 aa10.29□□□□□ -0.76
SMPD1-206ENST00000531336 RPL7L1Q6DKI1 246 aaKnown RBP10.29□□□□□ -0.76
SMPD1-206ENST00000531336 APRG1Q8IVJ8 170 aa10.29□□□□□ -0.76
SMPD1-206ENST00000531336 GATAD1Q8WUU5 269 aa10.29□□□□□ -0.76
SMPD1-206ENST00000531336 RNF24Q9Y225 148 aa10.29□□□□□ -0.76
SMPD1-206ENST00000531336 PRKDCP78527 4128 aaKnown RBP10.29□□□□□ -0.76
SMPD1-206ENST00000531336 TRAV5A0A0B4J249 113 aa10.28□□□□□ -0.76
SMPD1-206ENST00000531336 HMSDA8MTL9 139 aa10.28□□□□□ -0.76
SMPD1-206ENST00000531336 ZNF345Q14585 488 aa10.28□□□□□ -0.76
SMPD1-206ENST00000531336 ZNF124Q15973 351 aa10.28□□□□□ -0.76
SMPD1-206ENST00000531336 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.28□□□□□ -0.76
SMPD1-206ENST00000531336 KCNRGQ8N5I3 272 aa10.28□□□□□ -0.76
SMPD1-206ENST00000531336 CITED4Q96RK1 184 aa10.28□□□□□ -0.76
SMPD1-206ENST00000531336 TIMM9Q9Y5J7 89 aa10.28□□□□□ -0.76
SMPD1-206ENST00000531336 A8MZ25 164 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 CXCL2P19875 107 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 ATP6V0CP27449 155 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 MEOX2P50222 304 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 CMC4P56277 68 aaPredicted RBP10.27□□□□□ -0.77
SMPD1-206ENST00000531336 SNRPD3P62318 126 aaKnown RBP10.27□□□□□ -0.77
SMPD1-206ENST00000531336 PSMG4Q5JS54 123 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 FAM78BQ5VT40 261 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 SPATA31B1PQ5VZV4 182 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 MIR17HGQ75NE6 70 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 BPIFA4PQ86YQ2 179 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 ARPC5LQ9BPX5 153 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 FAM110AQ9BQ89 295 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.77
SMPD1-206ENST00000531336 A0A0D9SG52 128 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 RBMY1BA6NDE4 496 aaKnown RBP10.26□□□□□ -0.77
SMPD1-206ENST00000531336 RBMY1EA6NEQ0 496 aaKnown RBP10.26□□□□□ -0.77
SMPD1-206ENST00000531336 SOCS3O14543 225 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 TAAR5O14804 337 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 MRPS12O15235 138 aaKnown RBP10.26□□□□□ -0.77
SMPD1-206ENST00000531336 C1QBP02746 253 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 SNRPCP09234 159 aaKnown RBP10.26□□□□□ -0.77
SMPD1-206ENST00000531336 RBMY1DP0C7P1 496 aaKnown RBP10.26□□□□□ -0.77
SMPD1-206ENST00000531336 ID1P41134 155 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 PSMB3P49720 205 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 CD300CQ08708 224 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 C16orf92Q96LL3 132 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 C17orf77Q96MU5 243 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 ASCL2Q99929 193 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 B9D2Q9BPU9 175 aa10.26□□□□□ -0.77
SMPD1-206ENST00000531336 MRPL32Q9BYC8 188 aaKnown RBP10.26□□□□□ -0.77
SMPD1-206ENST00000531336 SEPSECSQ9HD40 501 aaKnown RBP10.26□□□□□ -0.77
SMPD1-206ENST00000531336 A0A087X0K7 114 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 KANTRA0A1W2PQU2 76 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 H3BTX0 84 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 BCL2L11O43521 198 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 RAB2AP61019 212 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 ACOT6Q3I5F7 207 aaPredicted RBP10.25□□□□□ -0.77
SMPD1-206ENST00000531336 SAMD13Q5VXD3 122 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 LINC00052Q96N35 136 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 PSMG3Q9BT73 122 aaPredicted RBP10.25□□□□□ -0.77
SMPD1-206ENST00000531336 SLC25A2Q9BXI2 301 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 CYTL1Q9NRR1 136 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 FUT9Q9Y231 359 aa10.25□□□□□ -0.77
SMPD1-206ENST00000531336 KNCNA6PVL3 124 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 ISLRO14498 428 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 PFDN1O60925 122 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 JTBO76095 146 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 RPL35AP18077 110 aaKnown RBP10.24□□□□□ -0.77
SMPD1-206ENST00000531336 M6PRP20645 277 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 RHOBP62745 196 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 IGFL4Q6B9Z1 124 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 FAM122CQ6P4D5 195 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 TMUB2Q71RG4 321 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 OR2G3Q8NGZ4 309 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 LRRC20Q8TCA0 184 aa10.24□□□□□ -0.77
SMPD1-206ENST00000531336 GNPNAT1Q96EK6 184 aaPredicted RBP10.24□□□□□ -0.77
SMPD1-206ENST00000531336 LOC102724200A0A096LPH7 203 aaPredicted RBP10.23□□□□□ -0.77
SMPD1-206ENST00000531336 EIF3GO75821 320 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMPD1-206ENST00000531336 IGLC2P0DOY2 106 aa10.23□□□□□ -0.77
SMPD1-206ENST00000531336 PYYP10082 97 aa10.23□□□□□ -0.77
SMPD1-206ENST00000531336 LCN15Q6UWW0 184 aa10.23□□□□□ -0.77
SMPD1-206ENST00000531336 SBSPONQ8IVN8 264 aa10.23□□□□□ -0.77
SMPD1-206ENST00000531336 STHQ8IWL8 128 aa10.23□□□□□ -0.77
SMPD1-206ENST00000531336 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
SMPD1-206ENST00000531336 OR10G4Q8NGN3 311 aa10.23□□□□□ -0.77
SMPD1-206ENST00000531336 OR10G9Q8NGN4 311 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms