RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 KCNIP3Q9Y2W7 256 aa9.25□□□□□ -0.93
HIF3A-214ENST00000531043 ANKRD20A5PA0PJZ0 165 aa9.24□□□□□ -0.93
HIF3A-214ENST00000531043 RGS5O15539 181 aa9.24□□□□□ -0.93
HIF3A-214ENST00000531043 TSPOP30536 169 aa9.24□□□□□ -0.93
HIF3A-214ENST00000531043 FGL1Q08830 312 aa9.24□□□□□ -0.93
HIF3A-214ENST00000531043 SSX7Q7RTT5 188 aa9.24□□□□□ -0.93
HIF3A-214ENST00000531043 PRRT1Q99946 306 aa9.24□□□□□ -0.93
HIF3A-214ENST00000531043 CACFD1Q9UGQ2 172 aa9.24□□□□□ -0.93
HIF3A-214ENST00000531043 BOLA2-SMG1P6H3BVE0 249 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
HIF3A-214ENST00000531043 ATP5G1P05496 136 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 HTN1P15515 57 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 ATP5G3P48201 142 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 CCL18P55774 89 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 ATP5IP56385 69 aaPredicted RBP9.23□□□□□ -0.93
HIF3A-214ENST00000531043 MRPS10P82664 201 aaKnown RBP9.23□□□□□ -0.93
HIF3A-214ENST00000531043 SPCS2Q15005 226 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 SAMD13Q5VXD3 122 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 ZNF738Q8NE65 137 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 OR1B1Q8NGR6 318 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 LINC01587Q99440 93 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 Q9H8V8 135 aa9.23□□□□□ -0.93
HIF3A-214ENST00000531043 DMBT1Q9UGM3 2413 aaPredicted RBP9.23□□□□□ -0.93
HIF3A-214ENST00000531043 CBY3A6NI87 242 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 CTDSPLO15194 276 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
HIF3A-214ENST00000531043 RAB11AP62491 216 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 DLK1P80370 383 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 IL18Q14116 193 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 GGNBP1Q5YKI7 109 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 GPR141Q7Z602 305 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 OR4D5Q8NGN0 318 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 NOP10Q9NPE3 64 aaKnown RBP9.22□□□□□ -0.93
HIF3A-214ENST00000531043 MCUBQ9NWR8 336 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 SLC45A2Q9UMX9 530 aa9.22□□□□□ -0.93
HIF3A-214ENST00000531043 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
HIF3A-214ENST00000531043 H3BRN7 92 aa9.21□□□□□ -0.94
HIF3A-214ENST00000531043 RHOBP62745 196 aa9.21□□□□□ -0.94
HIF3A-214ENST00000531043 HIST1H1AQ02539 215 aaPredicted RBP9.21□□□□□ -0.94
HIF3A-214ENST00000531043 CLINT1Q14677 625 aa9.21□□□□□ -0.94
HIF3A-214ENST00000531043 DIRAS2Q96HU8 199 aa9.21□□□□□ -0.94
HIF3A-214ENST00000531043 TMEM147Q9BVK8 224 aa9.21□□□□□ -0.94
HIF3A-214ENST00000531043 A0A0J9YY99 117 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 H3BP45 60 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 WRBO00258 174 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 CXCL3P19876 107 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 HOXA5P20719 270 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 TAS2R60P59551 318 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 B2MP61769 119 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 ACOT7LQ6ZUV0 252 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 BPIFCQ8NFQ6 507 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 OR8A1Q8NGG7 326 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
HIF3A-214ENST00000531043 SHANK2-AS3Q9BTD1 123 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 PARD6GQ9BYG4 376 aaPredicted RBP9.2□□□□□ -0.94
HIF3A-214ENST00000531043 SCP2D1Q9UJQ7 156 aa9.2□□□□□ -0.94
HIF3A-214ENST00000531043 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 CFDP00746 253 aaPredicted RBP9.19□□□□□ -0.94
HIF3A-214ENST00000531043 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
HIF3A-214ENST00000531043 SRPXP78539 464 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 AKR1C1Q04828 323 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 OR5I1Q13606 314 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 ESRGQ1W209 222 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 SPANXN5Q5MJ07 72 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 TMEM144Q7Z5S9 345 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 TMED4Q7Z7H5 227 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 C16orf74Q96GX8 76 aa9.19□□□□□ -0.94
HIF3A-214ENST00000531043 TIMM8BQ9Y5J9 83 aaPredicted RBP9.19□□□□□ -0.94
HIF3A-214ENST00000531043 ANXA3P12429 323 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 PSG3Q16557 428 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 CYP2G1PQ6ZSU1 146 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 LINC00612Q8N6U2 182 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 GPR82Q96P67 336 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 SCGB3A2Q96PL1 93 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 SOSTQ9BQB4 213 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 Q9H3A6 140 aa9.18□□□□□ -0.94
HIF3A-214ENST00000531043 DUXBA0A1W2PPF3 345 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 ZNF701M0R085 212 aaPredicted RBP9.17□□□□□ -0.94
HIF3A-214ENST00000531043 MRPS12O15235 138 aaKnown RBP9.17□□□□□ -0.94
HIF3A-214ENST00000531043 SYNGR2O43760 224 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 MED6O75586 246 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 CCNKO75909 580 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 SLC25A6P12236 298 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 PATE2Q6UY27 113 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 TMEM256Q8N2U0 113 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 LRTM2Q8N967 370 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 GNPNAT1Q96EK6 184 aaPredicted RBP9.17□□□□□ -0.94
HIF3A-214ENST00000531043 PPP1R14DQ9NXH3 145 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 ZNF586Q9NXT0 402 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 HIGD1AQ9Y241 93 aa9.17□□□□□ -0.94
HIF3A-214ENST00000531043 A0A087X0K7 114 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 GAGE12BA1L429 117 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 SMCO3A2RU48 225 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 PRAC2D3DTV9 90 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 HYPMO75409 117 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 GAGE7O76087 117 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 IL5P05113 134 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 HOXB5P09067 269 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms