RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 DNAH17Q9UFH2 4485 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 HBE1P02100 147 aa11.24□□□□□ -0.61
CPSF1-205ENST00000531042 S100A7P31151 101 aa11.24□□□□□ -0.61
CPSF1-205ENST00000531042 POLR2GP62487 172 aaKnown RBP eCLIP11.24□□□□□ -0.61
CPSF1-205ENST00000531042 SPANXN2Q5MJ10 180 aa11.24□□□□□ -0.61
CPSF1-205ENST00000531042 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
CPSF1-205ENST00000531042 LINC00336Q6ZUF6 198 aa11.24□□□□□ -0.61
CPSF1-205ENST00000531042 FAM210BQ96KR6 192 aa11.24□□□□□ -0.61
CPSF1-205ENST00000531042 KRTAP17-1Q9BYP8 105 aa11.24□□□□□ -0.61
CPSF1-205ENST00000531042 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
CPSF1-205ENST00000531042 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 LOC102723971A0A1B0GUV8 181 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 NAP1L6A6NFF2 107 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 NDUFB6O95139 128 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 ZNF846Q147U1 533 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 OXA1LQ15070 435 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 RRN3P1Q2M238 152 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
CPSF1-205ENST00000531042 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
CPSF1-205ENST00000531042 TRAV8-2A0A0B4J237 113 aa11.22□□□□□ -0.61
CPSF1-205ENST00000531042 SMCO3A2RU48 225 aa11.22□□□□□ -0.61
CPSF1-205ENST00000531042 PMS2P5A8MQ11 134 aa11.22□□□□□ -0.61
CPSF1-205ENST00000531042 H3BRN7 92 aa11.22□□□□□ -0.61
CPSF1-205ENST00000531042 IL5P05113 134 aa11.22□□□□□ -0.61
CPSF1-205ENST00000531042 BAK1Q16611 211 aa11.22□□□□□ -0.61
CPSF1-205ENST00000531042 IGFL4Q6B9Z1 124 aa11.22□□□□□ -0.61
CPSF1-205ENST00000531042 SLC25A39Q9BZJ4 359 aaPredicted RBP11.22□□□□□ -0.61
CPSF1-205ENST00000531042 FLVCR2Q9UPI3 526 aa11.22□□□□□ -0.61
CPSF1-205ENST00000531042 SSSCA1O60232 199 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.61
CPSF1-205ENST00000531042 IFNA21P01568 189 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 INPP1P49441 399 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 CNN1P51911 297 aaKnown RBP11.21□□□□□ -0.61
CPSF1-205ENST00000531042 PLP1P60201 277 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 FGL1Q08830 312 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 RNF182Q8N6D2 247 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 OR11H7Q8NGC8 314 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 SMIM8Q96KF7 97 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 SHANK2-AS3Q9BTD1 123 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 TMEM208Q9BTX3 173 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 KIAA1109Q2LD37 5005 aa11.21□□□□□ -0.61
CPSF1-205ENST00000531042 M0R2N4 97 aa11.2□□□□□ -0.62
CPSF1-205ENST00000531042 HYPMO75409 117 aa11.2□□□□□ -0.62
CPSF1-205ENST00000531042 OR4E1P0C645 316 aa11.2□□□□□ -0.62
CPSF1-205ENST00000531042 RAP2BP61225 183 aa11.2□□□□□ -0.62
CPSF1-205ENST00000531042 SPINK13Q1W4C9 94 aa11.2□□□□□ -0.62
CPSF1-205ENST00000531042 TRIQKQ629K1 86 aa11.2□□□□□ -0.62
CPSF1-205ENST00000531042 A0A1B0GVY2 172 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 M0R2Z0 102 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
CPSF1-205ENST00000531042 CCNKO75909 580 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 LINC00869P0C866 280 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 HTN3P15516 51 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 RPL7P18124 248 aaKnown RBP11.19□□□□□ -0.62
CPSF1-205ENST00000531042 RRAS2P62070 204 aaPredicted RBP11.19□□□□□ -0.62
CPSF1-205ENST00000531042 SELENOTP62341 195 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 DLK1P80370 383 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 LGALS9BQ3B8N2 356 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 TMEM14EPQ6UXP3 125 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 NPVFQ9HCQ7 196 aa11.19□□□□□ -0.62
CPSF1-205ENST00000531042 LINC00854A0A1B0GVQ3 168 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 FNDC10F2Z333 226 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 RTL8CO15255 209 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 INSP01308 110 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 PRM2P04554 102 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 OR5G3P0C626 314 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 METTL15P1P0C7V9 234 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 ANXA7P20073 488 aaKnown RBP11.18□□□□□ -0.62
CPSF1-205ENST00000531042 BTCP35070 178 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 DAD1P61803 113 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 C4orf46Q504U0 113 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 UBE2DNLQ8IWF7 75 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 ZNF738Q8NE65 137 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 SDHCQ99643 169 aaPredicted RBP11.18□□□□□ -0.62
CPSF1-205ENST00000531042 PKHD1P08F94 4074 aa11.18□□□□□ -0.62
CPSF1-205ENST00000531042 A0A087X0K7 114 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 PRSS29PA6NIE9 313 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 ZNF705GA8MUZ8 300 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-205ENST00000531042 K7EPK0 472 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 SCGB1D2O95969 90 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 B2MP61769 119 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 IAH1Q2TAA2 248 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-205ENST00000531042 RNF212Q495C1 297 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 OR10P1Q8NGE3 313 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 ARL6Q9H0F7 186 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 PKD1P98161 4303 aa11.17□□□□□ -0.62
CPSF1-205ENST00000531042 CENPXA8MT69 81 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 BOLA2-SMG1P6H3BVE0 249 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 TSC22D2O75157 780 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 CXCL3P19876 107 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 TSPOP30536 169 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 TAS2R30P59541 319 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 TMEM88Q6PEY1 159 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 TEPPQ6URK8 271 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 S100A7AQ86SG5 101 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms