RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 EFNB3Q15768 340 aa5.97□□□□□ -1.45
CTNND1-229ENST00000531014 ZNF638Q14966 1978 aaKnown RBP5.97□□□□□ -1.45
CTNND1-229ENST00000531014 TRBV5-3A0A0A0MS03 114 aa5.97□□□□□ -1.45
CTNND1-229ENST00000531014 A0A1B0GW64 132 aa5.97□□□□□ -1.45
CTNND1-229ENST00000531014 C12orf77C9JDV5 145 aa5.97□□□□□ -1.45
CTNND1-229ENST00000531014 IGHV3-11P01762 117 aa5.97□□□□□ -1.45
CTNND1-229ENST00000531014 PEBP1P30086 187 aaKnown RBP5.97□□□□□ -1.45
CTNND1-229ENST00000531014 FAM236AA0A1B0GUQ0 79 aa5.96□□□□□ -1.45
CTNND1-229ENST00000531014 FAM236BA0A1B0GV22 79 aa5.96□□□□□ -1.45
CTNND1-229ENST00000531014 PRSS47A8MTI9 375 aa5.96□□□□□ -1.45
CTNND1-229ENST00000531014 J3QW42 95 aa5.96□□□□□ -1.45
CTNND1-229ENST00000531014 LINC01551Q86U37 167 aa5.96□□□□□ -1.45
CTNND1-229ENST00000531014 TMEM141Q96I45 108 aa5.96□□□□□ -1.45
CTNND1-229ENST00000531014 FNDC1Q4ZHG4 1894 aaPredicted RBP5.96□□□□□ -1.45
CTNND1-229ENST00000531014 IGHV1-45A0A0A0MS14 117 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 PFN2P35080 140 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 C8orf46Q8TAG6 207 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 KLF14Q8TD94 323 aaPredicted RBP5.96□□□□□ -1.46
CTNND1-229ENST00000531014 AMELYQ99218 206 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 DEPPQ9NTK1 212 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 TRGV1A0A0A0MS02 117 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 IGLV1-36A0A0B4J1U3 117 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 IGHV3-73A0A0B4J1V6 119 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 THBDP07204 575 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 C1QTNF5Q9BXJ0 243 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 IGHV3OR16-10A0A075B7F0 116 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 A0A0A6YYD4 124 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 CRYBA2P53672 197 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 HERV-K104P63124 156 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 C3orf36Q3SXR2 165 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 ZFP2Q6ZN57 461 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 THAP8Q8NA92 274 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 NUP35Q8NFH5 326 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 RTBDNQ9BSG5 229 aaPredicted RBP5.96□□□□□ -1.46
CTNND1-229ENST00000531014 TTTY12Q9BZ98 90 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 LIME1Q9H400 295 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 FRMPD3Q5JV73 1810 aa5.96□□□□□ -1.46
CTNND1-229ENST00000531014 NGFRP08138 427 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 RNASE2P10153 161 aaKnown RBP5.95□□□□□ -1.46
CTNND1-229ENST00000531014 BVES-AS1Q5T3Y7 98 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 FAM166AQ6J272 317 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 Q71RC1 249 aaPredicted RBP5.95□□□□□ -1.46
CTNND1-229ENST00000531014 ORMDL1Q9P0S3 153 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 ZNF319Q9P2F9 582 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 WDR83OSQ9Y284 106 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 TRAV1-1A0A0B4J248 108 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 A0A0B4J2C4 111 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 LHBP01229 141 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 C8orf82Q6P1X6 216 aaPredicted RBP5.95□□□□□ -1.46
CTNND1-229ENST00000531014 ZNF721Q8TF20 911 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 MYEOVQ96EZ4 313 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 RTTNQ86VV8 2226 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 C15orf61A6NNL5 157 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 NPYP01303 97 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 BAALC-AS2P0C853 105 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 LIMS1P48059 325 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 Q0VG73 95 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 SIGLEC15Q6ZMC9 328 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 RNF126Q9BV68 326 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 RP1P56715 2156 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 ZNF138P52744 262 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 CEND1Q8N111 149 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 WFDC11Q8NEX6 87 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 MCRIP2Q9BUT9 160 aaKnown RBP5.95□□□□□ -1.46
CTNND1-229ENST00000531014 TM2D1Q9BX74 207 aa5.95□□□□□ -1.46
CTNND1-229ENST00000531014 A0A1B0GTI1 187 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 NBR2O15453 112 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 LILRA1O75019 489 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 CRYGCP07315 174 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 COX8AP10176 69 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 Q6ZS92 163 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 C14orf178Q8N769 122 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-229ENST00000531014 NEU4Q8WWR8 484 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-229ENST00000531014 LHFPL6Q9Y693 200 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 LYL1P12980 280 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 ATP1A1-AS1Q5TC04 95 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 FAM168AQ92567 244 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 C18orf12Q96KH6 178 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 AGMATQ9BSE5 352 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 FAM60AQ9NP50 221 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 NDUFA12Q9UI09 145 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 SIPA1L1O43166 1804 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 GREB1LQ9C091 1923 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-229ENST00000531014 IGKV2-40A0A087WW87 121 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-229ENST00000531014 B9A039 149 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 IGKV2D-40P01614 121 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-229ENST00000531014 IGFL3Q6UXB1 125 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 TRPT1Q86TN4 253 aaKnown RBP5.94□□□□□ -1.46
CTNND1-229ENST00000531014 C20orf173Q96LM9 149 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 PIEZO1Q92508 2521 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 SH2D1AO60880 128 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 PPP1R32Q7Z5V6 425 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 ZIC4Q8N9L1 334 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 DEFB104AQ8WTQ1 72 aa5.94□□□□□ -1.46
CTNND1-229ENST00000531014 SNRNP200O75643 2136 aaKnown RBP5.93□□□□□ -1.46
CTNND1-229ENST00000531014 TRAV26-1A0A087WT03 109 aa5.93□□□□□ -1.46
CTNND1-229ENST00000531014 A0A1W2PRX2 142 aa5.93□□□□□ -1.46
CTNND1-229ENST00000531014 FAM219BQ5XKK7 198 aa5.93□□□□□ -1.46
CTNND1-229ENST00000531014 AMTNQ6UX39 209 aa5.93□□□□□ -1.46
CTNND1-229ENST00000531014 MYH15Q9Y2K3 1946 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms