RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 DKK2Q9UBU2 259 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 FAM90A1Q86YD7 464 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 PTH2Q96A98 100 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 LINC01600Q96MT4 127 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 RTL8AQ9BWD3 113 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 PRRG4Q9BZD6 226 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 LINC00205P59089 165 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 PRCDQ00LT1 54 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 PRR31Q5SQ13 230 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 CRISPLD2Q9H0B8 497 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 IGKCP01834 107 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 PRTN3P24158 256 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 CD69Q07108 199 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 GAGE2EQ4V326 116 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 LYRM7Q5U5X0 104 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 GAGE2DQ9UEU5 116 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 INS-IGF2F8WCM5 200 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 C15orf65H3BRN8 121 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 PSPNO60542 156 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 CELA2AP08217 269 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 PYYP10082 97 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 GNG5P63218 68 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 SPRNQ5BIV9 151 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 C10orf113Q5VZT2 155 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 PDPNQ86YL7 162 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 IFI27L2Q9H2X8 130 aa6.49□□□□□ -1.37
CSDE1-214ENST00000530886 Q86TA4 180 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 YRDCQ86U90 279 aaKnown RBP6.48□□□□□ -1.37
CSDE1-214ENST00000530886 TIMM8BQ9Y5J9 83 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-214ENST00000530886 CABIN1Q9Y6J0 2220 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 UNC13CQ8NB66 2214 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 TCRAP04437 139 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 PPIFP30405 207 aaKnown RBP6.48□□□□□ -1.37
CSDE1-214ENST00000530886 TMEM78Q5T7P6 136 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 ORMDL3Q8N138 153 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 AJUBAQ96IF1 538 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 S1PR3Q99500 378 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 A0A1W2PR77 199 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 ATP5LO75964 103 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 ARMS2P0C7Q2 107 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 CXCL12P48061 93 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 FAM104BQ5XKR9 115 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 PATE2Q6UY27 113 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 DEFB118Q96PH6 123 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 RAB9BQ9NP90 201 aa6.48□□□□□ -1.37
CSDE1-214ENST00000530886 CSDC2Q9Y534 153 aaKnown RBP6.48□□□□□ -1.37
CSDE1-214ENST00000530886 TRBV20-1A0A075B6N2 111 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 IGHV1OR21-1A0A087WYE8 117 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 HOXA3O43365 443 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-214ENST00000530886 COX7A2P2O60397 106 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 CD27P26842 260 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 COL8A1P27658 744 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 THAP8Q8NA92 274 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 FBXL15Q9H469 300 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 DPM2O94777 84 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 IL4P05112 153 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 MYOD1P15172 320 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 CCL11P51671 97 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 TWIST1Q15672 202 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 VKORC1L1Q8N0U8 176 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 RASL10AQ92737 203 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 DNAJC30Q96LL9 226 aa6.47□□□□□ -1.37
CSDE1-214ENST00000530886 TMEM213A2RRL7 107 aa6.46□□□□□ -1.37
CSDE1-214ENST00000530886 D6R8Y8 96 aa6.46□□□□□ -1.37
CSDE1-214ENST00000530886 IGLV2-11P01706 119 aa6.46□□□□□ -1.37
CSDE1-214ENST00000530886 RNASE2P10153 161 aaKnown RBP6.46□□□□□ -1.37
CSDE1-214ENST00000530886 MRPL23Q16540 153 aaKnown RBP6.46□□□□□ -1.37
CSDE1-214ENST00000530886 TTC32Q5I0X7 151 aa6.46□□□□□ -1.37
CSDE1-214ENST00000530886 ASPMQ8IZT6 3477 aa6.46□□□□□ -1.37
CSDE1-214ENST00000530886 A0A1W2PPC4 97 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 PGPA6NDG6 321 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 ZNHIT1O43257 154 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 SPINT2O43291 252 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 UBE2D1P51668 147 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 C1orf229Q6ZS94 237 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-214ENST00000530886 PPDPFQ9H3Y8 114 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 F5P12259 2224 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 IGKV3D-15A0A087WSY6 115 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 A0A1W2PPI3 338 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 SNCGO76070 127 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 FCER1GP30273 86 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 OR10J6PQ8NGY7 276 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 TANC2Q9HCD6 1990 aa6.46□□□□□ -1.38
CSDE1-214ENST00000530886 A8MWV9 139 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 PPP1R27Q86WC6 154 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 MAPKAPK5-AS1Q8N8E1 139 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 RASL11BQ9BPW5 248 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 MT-CO3P00414 261 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 ATP5J2P56134 94 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 OR13A1Q8NGR1 328 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 KIR2DL4Q99706 377 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 UPK2O00526 184 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 CCL3P10147 92 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 FAM159AQ6UWV7 190 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 OTORQ9NRC9 128 aa6.45□□□□□ -1.38
CSDE1-214ENST00000530886 TRAV25A0A0B4J276 109 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms