RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 GP9P14770 177 aa11.1□□□□□ -0.63
TTC39A-216ENST00000530004 FOXE3Q13461 319 aa11.1□□□□□ -0.63
TTC39A-216ENST00000530004 TOMM20LQ6UXN7 152 aa11.1□□□□□ -0.63
TTC39A-216ENST00000530004 S100A7AQ86SG5 101 aa11.1□□□□□ -0.63
TTC39A-216ENST00000530004 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
TTC39A-216ENST00000530004 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.09□□□□□ -0.63
TTC39A-216ENST00000530004 BMPR1BO00238 502 aa11.09□□□□□ -0.63
TTC39A-216ENST00000530004 SNAPINO95295 136 aa11.09□□□□□ -0.63
TTC39A-216ENST00000530004 SNRPCP09234 159 aaKnown RBP11.09□□□□□ -0.63
TTC39A-216ENST00000530004 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-216ENST00000530004 TCTEX1D4Q5JR98 221 aa11.09□□□□□ -0.63
TTC39A-216ENST00000530004 RNF152Q8N8N0 203 aa11.09□□□□□ -0.63
TTC39A-216ENST00000530004 WFDC12Q8WWY7 111 aa11.09□□□□□ -0.63
TTC39A-216ENST00000530004 NKX6-2Q9C056 277 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-216ENST00000530004 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
TTC39A-216ENST00000530004 RABAC1Q9UI14 185 aa11.09□□□□□ -0.63
TTC39A-216ENST00000530004 IGHV3OR16-8A0A075B7F1 116 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 ZNF98A6NK75 572 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 F6UZH7 168 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 TRBV12-3P01733 135 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 ARL3P36405 182 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 KRTAP10-3P60369 221 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 RPUSD4Q96CM3 377 aaKnown RBP11.08□□□□□ -0.64
TTC39A-216ENST00000530004 A0A1W2PRE2 83 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 H3BQ15 152 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 RPLP1P05386 114 aaKnown RBP11.08□□□□□ -0.64
TTC39A-216ENST00000530004 CD28P10747 220 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 NPPCP23582 126 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 ZNF674Q2M3X9 581 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 CLRN3Q8NCR9 226 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 BLNKQ8WV28 456 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 NIPSNAP3BQ9BS92 247 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 PARLQ9H300 379 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 TMEM14CQ9P0S9 112 aa11.08□□□□□ -0.64
TTC39A-216ENST00000530004 SCO2A0A1W2PP80 73 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 ZNF727A8MUV8 499 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 GGTLC3B5MD39 225 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 M0R036 132 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 NBEAP1P0C6P0 100 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 BPIFA4PQ86YQ2 179 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 MYOZ3Q8TDC0 251 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 C20orf24Q9BUV8 137 aa11.07□□□□□ -0.64
TTC39A-216ENST00000530004 NDUFB4O95168 129 aa11.06□□□□□ -0.64
TTC39A-216ENST00000530004 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
TTC39A-216ENST00000530004 HIST2H2BDQ6DRA6 164 aa11.06□□□□□ -0.64
TTC39A-216ENST00000530004 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
TTC39A-216ENST00000530004 H3BTX0 84 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
TTC39A-216ENST00000530004 S100A7P31151 101 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 TVP23CQ96ET8 276 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 OR5B12Q96R08 314 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
TTC39A-216ENST00000530004 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
TTC39A-216ENST00000530004 FAM74A3Q4VXF1 159 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 OR4F17Q8NGA8 305 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 UBE2E2Q96LR5 201 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 MDFIQ99750 246 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 DERL1Q9BUN8 251 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 ZNF586Q9NXT0 402 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 RNF24Q9Y225 148 aa11.05□□□□□ -0.64
TTC39A-216ENST00000530004 MRPS12O15235 138 aaKnown RBP11.04□□□□□ -0.64
TTC39A-216ENST00000530004 IGLC2P0DOY2 106 aa11.04□□□□□ -0.64
TTC39A-216ENST00000530004 KHDC1LQ5JSQ8 128 aa11.04□□□□□ -0.64
TTC39A-216ENST00000530004 FAM209BQ5JX69 171 aa11.04□□□□□ -0.64
TTC39A-216ENST00000530004 C12orf54Q6X4T0 127 aa11.04□□□□□ -0.64
TTC39A-216ENST00000530004 METTL26Q96S19 204 aa11.04□□□□□ -0.64
TTC39A-216ENST00000530004 CITED1Q99966 193 aa11.04□□□□□ -0.64
TTC39A-216ENST00000530004 ELOVL1Q9BW60 279 aa11.04□□□□□ -0.64
TTC39A-216ENST00000530004 PEF1Q9UBV8 284 aaKnown RBP11.04□□□□□ -0.64
TTC39A-216ENST00000530004 NDUFA4O00483 81 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 ZNF207O43670 478 aaKnown RBP11.03□□□□□ -0.64
TTC39A-216ENST00000530004 GGCTO75223 188 aaKnown RBP11.03□□□□□ -0.64
TTC39A-216ENST00000530004 CRYBB3P26998 211 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 CDX1P47902 265 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-216ENST00000530004 BTN1A1Q13410 526 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 OR8I2Q8N0Y5 310 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 ZNF747Q9BV97 191 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 NAT8Q9UHE5 227 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 TSSC4Q9Y5U2 329 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-216ENST00000530004 C7orf77A4D0Y5 90 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 RPL7P18124 248 aaKnown RBP11.03□□□□□ -0.64
TTC39A-216ENST00000530004 UNQ9165/PRO28630Q6UXU0 137 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 SDF2L1Q9HCN8 221 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 RPS10P5Q9NQ39 176 aa11.03□□□□□ -0.64
TTC39A-216ENST00000530004 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 IGHV3-66A0A0C4DH42 116 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 PGPA6NDG6 321 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 BUB3O43684 328 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 MYCNOSP40205 109 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 AKR1C3P42330 323 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 PNRC1Q12796 327 aaPredicted RBP11.02□□□□□ -0.65
TTC39A-216ENST00000530004 RHEBQ15382 184 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 TMEM241Q24JQ0 296 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 C18orf65Q6ZTR6 163 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 C17orf77Q96MU5 243 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms