RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	CRP	P02741	224 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	ARMS2	P0C7Q2	107 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	IGLL1	P15814	213 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	CRYGS	P22914	178 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	C9orf118	A6NHY6	69 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	C17orf100	A8MU93	164 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	ADARB2-AS1	A8MUL3	147 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	SPX	Q9BT56	116 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	CSTL1	Q9H114	145 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	TMEM133	Q9H2Q1	129 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	HEATR1	Q9H583	2144 aa	Known RBP	6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	C15orf62	A8K5M9	175 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	AZU1	P20160	251 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986		Q0VG73	95 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	NRN1L	Q496H8	165 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	MORN3	Q6PF18	240 aa	Predicted RBP	6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	TMEM167A	Q8TBQ9	72 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	DOCK11	Q5JSL3	2073 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	ABCA1	O95477	2261 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	CFHR2	P36980	270 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	QRFP	P83859	136 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	NDP	Q00604	133 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	THSD7B	Q9C0I4	1608 aa		6.25	□□□□□ -1.41
CTNND1-223	ENST00000529986	TMEM213	A2RRL7	107 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	TCF15	Q12870	199 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	NABP1	Q96AH0	204 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	CHCHD5	Q9BSY4	110 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986		K7ERJ3	54 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	FAM90A1	Q86YD7	464 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	ZIC4	Q8N9L1	334 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	ATP6V0B	Q99437	205 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	SCN5A	Q14524	2016 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	LRRK1	Q38SD2	2015 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	FAM90A9P	A6NNJ1	464 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	ZNF329	Q86UD4	541 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	DOCK4	Q8N1I0	1966 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	PF4	P02776	101 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	ZNF883	P0CG24	379 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	SIGLEC15	Q6ZMC9	328 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	TMEM86B	Q8N661	226 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	JPT2	Q9H910	190 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	LY96	Q9Y6Y9	160 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	PINLYP	A6NC86	204 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	PLEKHB2	Q96CS7	222 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	ABHD17A	Q96GS6	310 aa		6.24	□□□□□ -1.41
CTNND1-223	ENST00000529986	MGAM	O43451	1857 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986		A0A087WWL8	130 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	GAGE12H	A6NDE8	117 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	PRR19	A6NJB7	356 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	CSRP1	P21291	193 aa	Known RBP	6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	ANXA2R	Q3ZCQ2	193 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	FLVCR1-AS1	Q8TAF5	88 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	VWCE	Q96DN2	955 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	AMTN	Q6UX39	209 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	C20orf204	Q6ZNR8	217 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	COLCA1	Q6ZS62	124 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	SS18L2	Q9UHA2	77 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	TET1	Q8NFU7	2136 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	TRGV4	A0A0C4DH28	118 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	LINC01549	A6NIU2	74 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986		H3BMG7	143 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986		K7EP34	96 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	ERCC8	Q13216	396 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	SLA	Q13239	276 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	MORN5	Q5VZ52	161 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	C3orf36	Q3SXR2	165 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	TEX43	Q6ZNM6	134 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	CD177	Q8N6Q3	437 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	MRAP	Q8TCY5	172 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	KIAA2026	Q5HYC2	2103 aa		6.23	□□□□□ -1.41
CTNND1-223	ENST00000529986	SRRM4	A7MD48	611 aa	Known RBP	6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986		H3BMM0	161 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	IGHV3-53	P01767	116 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	VWC2	Q2TAL6	325 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	STH	Q8IWL8	128 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	ZNF114	Q8NC26	417 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	UBE2W	Q96B02	151 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	PNRC2	Q9NPJ4	139 aa	Known RBP	6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	GBF1	Q92538	1859 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	IGHV1-18	A0A0C4DH31	117 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	CEACAM8	P31997	349 aa	Predicted RBP	6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	PAX8	Q06710	450 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	ZNF726P1	Q15940	193 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	BVES-AS1	Q5T3Y7	98 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	UNQ6494/PRO21346	Q6UXR6	183 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	CCL19	Q99731	98 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	WIPF3	A6NGB9	483 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	SLC25A16	P16260	332 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	C11orf44	Q8N8P7	122 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	C1orf162	Q8NEQ5	155 aa	Predicted RBP	6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	NCOR1	O75376	2440 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	POLE	Q07864	2286 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	C15orf32	Q32M92	178 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	C1orf159	Q96HA4	380 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	DPH3P1	Q9H4G8	78 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	C7orf69	Q9H7B7	122 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	TSC2	P49815	1807 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	TRAV13-1	A0A0B4J241	112 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	RS1	O15537	224 aa		6.22	□□□□□ -1.41
CTNND1-223	ENST00000529986	SRSF7	Q16629	238 aa	Known RBP eCLIP	6.22	□□□□□ -1.41	1e-6	■■□□□ 13.9

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms