RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 BAXQ07812 192 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 STHQ8IWL8 128 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 OR5C1Q8NGR4 320 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 C17orf77Q96MU5 243 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 RSG1Q9BU20 258 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 MED28Q9H204 178 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 ARV1Q9H2C2 271 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 EDA2RQ9HAV5 297 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 TP53TG1Q9Y2A0 90 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 AGRNO00468 2067 aa9.32□□□□□ -0.92
CCDC90B-216ENST00000529856 ELOA3CA0A087WX78 387 aaPredicted RBP9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 MPDU1O75352 247 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 ID1P41134 155 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 RPL29P47914 159 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 PSMB3P49720 205 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 MEOX2P50222 304 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 OXA1LQ15070 435 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 FCN2Q15485 313 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 ACTL10Q5JWF8 245 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 SAMD13Q5VXD3 122 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 MIC13Q5XKP0 118 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 Q6ZRG5 221 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 OR11H7Q8NGC8 314 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 TMEM37Q8WXS4 190 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 RNF183Q96D59 192 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 DNAJC4Q9NNZ3 241 aa9.31□□□□□ -0.92
CCDC90B-216ENST00000529856 ISLRO14498 428 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 SPRY2O43597 315 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 COX7A2P2O60397 106 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 LYL1P12980 280 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 RPL7P18124 248 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 FGF7P21781 194 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 OPCMLQ14982 345 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 DEFB135Q30KP9 77 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 LINC00305Q7Z4B0 112 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 LINC00052Q96N35 136 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 SLC39A9Q9NUM3 307 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 MBD2Q9UBB5 411 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 RNF24Q9Y225 148 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 HSPB11Q9Y547 144 aa9.3□□□□□ -0.92
CCDC90B-216ENST00000529856 RPL12P30050 165 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 B2MP61769 119 aa9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 CLINT1Q14677 625 aa9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 MORN3Q6PF18 240 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 OR1L4Q8NGR5 311 aa9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 THAP6Q8TBB0 222 aa9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 C16orf92Q96LL3 132 aa9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
CCDC90B-216ENST00000529856 H3BMM0 161 aa9.28□□□□□ -0.92
CCDC90B-216ENST00000529856 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-216ENST00000529856 CA1P00915 261 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-216ENST00000529856 GIG44P09565 113 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-216ENST00000529856 SPP1P10451 314 aa9.28□□□□□ -0.92
CCDC90B-216ENST00000529856 ATF4P18848 351 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-216ENST00000529856 MUC7Q8TAX7 377 aa9.28□□□□□ -0.92
CCDC90B-216ENST00000529856 PXMP4Q9Y6I8 212 aa9.28□□□□□ -0.92
CCDC90B-216ENST00000529856 A0A087X0K7 114 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 TRAV8-2A0A0B4J237 113 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 C3orf84H3BNL1 204 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 HLA-DRB4P13762 266 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 DEFB1P60022 68 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 FGL1Q08830 312 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 MORN5Q5VZ52 161 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 FOXI2Q6ZQN5 318 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 GATAD1Q8WUU5 269 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 ASB13Q8WXK3 278 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 C20orf173Q96LM9 149 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 PFDN5Q99471 154 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 ATP5SQ99766 215 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 WDR61Q9GZS3 305 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 SAV1Q9H4B6 383 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 HLA-DRB4X5D2U9 266 aa9.27□□□□□ -0.93
CCDC90B-216ENST00000529856 DNAH7Q8WXX0 4024 aa9.26□□□□□ -0.93
CCDC90B-216ENST00000529856 GIPP09681 153 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-216ENST00000529856 TMEM41BQ5BJD5 291 aa9.26□□□□□ -0.93
CCDC90B-216ENST00000529856 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
CCDC90B-216ENST00000529856 SPATA31B1PQ5VZV4 182 aa9.26□□□□□ -0.93
CCDC90B-216ENST00000529856 BPIFA4PQ86YQ2 179 aa9.26□□□□□ -0.93
CCDC90B-216ENST00000529856 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
CCDC90B-216ENST00000529856 RPRMQ9NS64 109 aa9.26□□□□□ -0.93
CCDC90B-216ENST00000529856 TRAV5A0A0B4J249 113 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 C4BPBP20851 252 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 NUTF2P61970 127 aaKnown RBP9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 Q5BKY6 102 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 IGFL4Q6B9Z1 124 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 EBLN2Q6P2I7 272 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 ZNF709Q8N972 641 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 RARRES2Q99969 163 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 SMIM3Q9BZL3 60 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 WFDC1Q9HC57 220 aa9.25□□□□□ -0.93
CCDC90B-216ENST00000529856 A0A0J9YX75 114 aa9.24□□□□□ -0.93
CCDC90B-216ENST00000529856 C17orf112F2Z3M2 114 aa9.24□□□□□ -0.93
CCDC90B-216ENST00000529856 F6UB75 175 aa9.24□□□□□ -0.93
CCDC90B-216ENST00000529856 IFNA5P01569 189 aa9.24□□□□□ -0.93
CCDC90B-216ENST00000529856 IGLC2P0DOY2 106 aa9.24□□□□□ -0.93
CCDC90B-216ENST00000529856 CXCL2P19875 107 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms