RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 ZNF680Q8NEM1 530 aa9.56□□□□□ -0.88
SCN3B-205ENST00000528267 ATP5SQ99766 215 aa9.56□□□□□ -0.88
SCN3B-205ENST00000528267 MAP6D1Q9H9H5 199 aa9.56□□□□□ -0.88
SCN3B-205ENST00000528267 CYTL1Q9NRR1 136 aa9.56□□□□□ -0.88
SCN3B-205ENST00000528267 AGRNO00468 2067 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 OR11H12B2RN74 326 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 SOCS3O14543 225 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 TPT1P13693 172 aaKnown RBP9.55□□□□□ -0.88
SCN3B-205ENST00000528267 RPL29P47914 159 aaKnown RBP9.55□□□□□ -0.88
SCN3B-205ENST00000528267 EIF5AP63241 154 aaKnown RBP9.55□□□□□ -0.88
SCN3B-205ENST00000528267 APRG1Q8IVJ8 170 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 SBSPONQ8IVN8 264 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 STXBP6Q8NFX7 210 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 STOML3Q8TAV4 291 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 SHANK2-AS3Q9BTD1 123 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 RSG1Q9BU20 258 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 ARV1Q9H2C2 271 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 TMEM231Q9H6L2 316 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 SRD5A3Q9H8P0 318 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 SLC25A22Q9H936 323 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 PXMP4Q9Y6I8 212 aa9.55□□□□□ -0.88
SCN3B-205ENST00000528267 BORCS7-ASMTA0A0B4J1R7 106 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 OR4C46A6NHA9 309 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 HYPMO75409 117 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 OR5G3P0C626 314 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 BMI1P35226 326 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 B2MP61769 119 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 RPL7L1Q6DKI1 246 aaKnown RBP9.54□□□□□ -0.88
SCN3B-205ENST00000528267 GRAMD2BQ96HH9 432 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 ASCL2Q99929 193 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 B9D2Q9BPU9 175 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 SLC39A9Q9NUM3 307 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 HIGD1AQ9Y241 93 aa9.54□□□□□ -0.88
SCN3B-205ENST00000528267 TGP01266 2768 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 TRAV2A0A0B4J234 112 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 TRAV5A0A0B4J249 113 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 JTBO76095 146 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 DEFB1P60022 68 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 RPL11P62913 178 aaKnown RBP9.53□□□□□ -0.88
SCN3B-205ENST00000528267 C1orf194Q5T5A4 169 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 ALKAL2Q6UX46 152 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 BAP18Q8IXM2 172 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 PHYHIPLQ96FC7 376 aa9.53□□□□□ -0.88
SCN3B-205ENST00000528267 NARS2Q96I59 477 aaKnown RBP9.53□□□□□ -0.88
SCN3B-205ENST00000528267 HELTA6NFD8 242 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 MPDU1O75352 247 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 CD5P06127 495 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 ZNF688P0C7X2 276 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 DEFB131AP59861 70 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 ZNF266Q14584 549 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 LINC00305Q7Z4B0 112 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 PARD6GQ9BYG4 376 aaPredicted RBP9.52□□□□□ -0.89
SCN3B-205ENST00000528267 NRN1Q9NPD7 142 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 TENM3Q9P273 2699 aa9.52□□□□□ -0.89
SCN3B-205ENST00000528267 DNASE2O00115 360 aaPredicted RBP9.51□□□□□ -0.89
SCN3B-205ENST00000528267 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
SCN3B-205ENST00000528267 EIF3GO75821 320 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCN3B-205ENST00000528267 SNRPCP09234 159 aaKnown RBP9.51□□□□□ -0.89
SCN3B-205ENST00000528267 PXDC1Q5TGL8 231 aa9.51□□□□□ -0.89
SCN3B-205ENST00000528267 OR8I2Q8N0Y5 310 aa9.51□□□□□ -0.89
SCN3B-205ENST00000528267 C20orf173Q96LM9 149 aa9.51□□□□□ -0.89
SCN3B-205ENST00000528267 FAM110AQ9BQ89 295 aa9.51□□□□□ -0.89
SCN3B-205ENST00000528267 TRAV8-2A0A0B4J237 113 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 IFNA5P01569 189 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 PAFAH1B2P68402 229 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 RAB31Q13636 194 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 HAGHQ16775 308 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 C10orf113Q5VZT2 155 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 IGFL4Q6B9Z1 124 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 EIF5AL1Q6IS14 154 aaKnown RBP9.5□□□□□ -0.89
SCN3B-205ENST00000528267 SEPSECSQ9HD40 501 aaKnown RBP9.5□□□□□ -0.89
SCN3B-205ENST00000528267 RETNQ9HD89 108 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
SCN3B-205ENST00000528267 ELOA3CA0A087WX78 387 aaPredicted RBP9.49□□□□□ -0.89
SCN3B-205ENST00000528267 KNCNA6PVL3 124 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 H3BTX0 84 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 IGLC2P0DOY2 106 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 PRB4P10163 310 aaPredicted RBP9.49□□□□□ -0.89
SCN3B-205ENST00000528267 HLA-DMBP28068 263 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 RAB14P61106 215 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 GDF5OSQ5U4N7 250 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 Q6ZRG5 221 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 MIR17HGQ75NE6 70 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 HSD17B11Q8NBQ5 300 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 TMED6Q8WW62 240 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 FAM167A-AS1Q96KT0 104 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 SLC25A2Q9BXI2 301 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 SH3BGRL3Q9H299 93 aa9.49□□□□□ -0.89
SCN3B-205ENST00000528267 DNAH7Q8WXX0 4024 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 A0A087X0K7 114 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 H3BQ15 152 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 SLC17A3O00476 420 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 ATP6V0CP27449 155 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 GALR1P47211 349 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 PSMG4Q5JS54 123 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 CLLU1Q5K131 121 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 FFAR4Q5NUL3 377 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 FAM74A1Q5RGS3 127 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms