RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 STRAPQ9Y3F4 350 aaKnown RBP18.36■□□□□ 0.53
TRIM3-206ENST00000528227 DNAH17Q9UFH2 4485 aa18.35■□□□□ 0.53
TRIM3-206ENST00000528227 HTN3P15516 51 aa18.35■□□□□ 0.53
TRIM3-206ENST00000528227 UBE2DNLQ8IWF7 75 aa18.35■□□□□ 0.53
TRIM3-206ENST00000528227 S100A7P31151 101 aa18.34■□□□□ 0.53
TRIM3-206ENST00000528227 S100A5P33763 92 aa18.34■□□□□ 0.53
TRIM3-206ENST00000528227 TMEM144Q7Z5S9 345 aa18.34■□□□□ 0.53
TRIM3-206ENST00000528227 CCDC190Q86UF4 302 aa18.34■□□□□ 0.53
TRIM3-206ENST00000528227 TRAV8-2A0A0B4J237 113 aa18.33■□□□□ 0.52
TRIM3-206ENST00000528227 CNN1P51911 297 aaKnown RBP18.33■□□□□ 0.52
TRIM3-206ENST00000528227 UBE2MP61081 183 aaKnown RBP18.33■□□□□ 0.52
TRIM3-206ENST00000528227 ID3Q02535 119 aa18.33■□□□□ 0.52
TRIM3-206ENST00000528227 TMEM208Q9BTX3 173 aa18.33■□□□□ 0.52
TRIM3-206ENST00000528227 H3BRN7 92 aa18.32■□□□□ 0.52
TRIM3-206ENST00000528227 ADAP1O75689 374 aa18.32■□□□□ 0.52
TRIM3-206ENST00000528227 IGFL4Q6B9Z1 124 aa18.32■□□□□ 0.52
TRIM3-206ENST00000528227 CYP2G1PQ6ZSU1 146 aa18.32■□□□□ 0.52
TRIM3-206ENST00000528227 OR11H7Q8NGC8 314 aa18.32■□□□□ 0.52
TRIM3-206ENST00000528227 SLC25A39Q9BZJ4 359 aaPredicted RBP18.32■□□□□ 0.52
TRIM3-206ENST00000528227 IGLV2-18A0A075B6J9 118 aa18.31■□□□□ 0.52
TRIM3-206ENST00000528227 C9orf170A2RU37 121 aa18.31■□□□□ 0.52
TRIM3-206ENST00000528227 CRXO43186 299 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-206ENST00000528227 DUSP14O95147 198 aaKnown RBP18.31■□□□□ 0.52
TRIM3-206ENST00000528227 DAD1P61803 113 aa18.31■□□□□ 0.52
TRIM3-206ENST00000528227 POLR2GP62487 172 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRIM3-206ENST00000528227 SPINK13Q1W4C9 94 aa18.31■□□□□ 0.52
TRIM3-206ENST00000528227 Q6ZR54 194 aa18.31■□□□□ 0.52
TRIM3-206ENST00000528227 RNF182Q8N6D2 247 aa18.31■□□□□ 0.52
TRIM3-206ENST00000528227 SHANK2-AS3Q9BTD1 123 aa18.31■□□□□ 0.52
TRIM3-206ENST00000528227 SMCO3A2RU48 225 aa18.3■□□□□ 0.52
TRIM3-206ENST00000528227 M0R2Z0 102 aa18.3■□□□□ 0.52
TRIM3-206ENST00000528227 INSP01308 110 aa18.3■□□□□ 0.52
TRIM3-206ENST00000528227 IL5P05113 134 aa18.3■□□□□ 0.52
TRIM3-206ENST00000528227 RNF212Q495C1 297 aa18.3■□□□□ 0.52
TRIM3-206ENST00000528227 TMEM88Q6PEY1 159 aa18.3■□□□□ 0.52
TRIM3-206ENST00000528227 PCLOQ9Y6V0 5065 aa18.29■□□□□ 0.52
TRIM3-206ENST00000528227 PMS2P5A8MQ11 134 aa18.29■□□□□ 0.52
TRIM3-206ENST00000528227 FGL1Q08830 312 aa18.29■□□□□ 0.52
TRIM3-206ENST00000528227 PSENENQ9NZ42 101 aa18.29■□□□□ 0.52
TRIM3-206ENST00000528227 HIGD1AQ9Y241 93 aa18.29■□□□□ 0.52
TRIM3-206ENST00000528227 PKHD1P08F94 4074 aa18.28■□□□□ 0.52
TRIM3-206ENST00000528227 CCDC160A6NGH7 325 aa18.28■□□□□ 0.52
TRIM3-206ENST00000528227 PRM2P04554 102 aa18.28■□□□□ 0.52
TRIM3-206ENST00000528227 RAP2BP61225 183 aa18.28■□□□□ 0.52
TRIM3-206ENST00000528227 SRRQ9GZT4 340 aa18.28■□□□□ 0.52
TRIM3-206ENST00000528227 ZNF705GA8MUZ8 300 aaPredicted RBP18.27■□□□□ 0.52
TRIM3-206ENST00000528227 SSSCA1O60232 199 aa18.27■□□□□ 0.52
TRIM3-206ENST00000528227 HYPMO75409 117 aa18.27■□□□□ 0.52
TRIM3-206ENST00000528227 RPL7P18124 248 aaKnown RBP18.27■□□□□ 0.52
TRIM3-206ENST00000528227 PLP1P60201 277 aa18.27■□□□□ 0.52
TRIM3-206ENST00000528227 BAP18Q8IXM2 172 aa18.27■□□□□ 0.52
TRIM3-206ENST00000528227 ZNF738Q8NE65 137 aa18.27■□□□□ 0.52
TRIM3-206ENST00000528227 LYRM9A8MSI8 78 aa18.26■□□□□ 0.51
TRIM3-206ENST00000528227 NDUFB6O95139 128 aa18.26■□□□□ 0.51
TRIM3-206ENST00000528227 LINC00869P0C866 280 aa18.26■□□□□ 0.51
TRIM3-206ENST00000528227 B2MP61769 119 aa18.26■□□□□ 0.51
TRIM3-206ENST00000528227 SMIM8Q96KF7 97 aa18.26■□□□□ 0.51
TRIM3-206ENST00000528227 UHRF2Q96PU4 802 aa18.26■□□□□ 0.51
TRIM3-206ENST00000528227 FLVCR2Q9UPI3 526 aa18.26■□□□□ 0.51
TRIM3-206ENST00000528227 NAP1L6A6NFF2 107 aa18.25■□□□□ 0.51
TRIM3-206ENST00000528227 BOLA2-SMG1P6H3BVE0 249 aa18.25■□□□□ 0.51
TRIM3-206ENST00000528227 CCNKO75909 580 aa18.25■□□□□ 0.51
TRIM3-206ENST00000528227 OR5G3P0C626 314 aa18.25■□□□□ 0.51
TRIM3-206ENST00000528227 MED14OSP0DP75 135 aa18.25■□□□□ 0.51
TRIM3-206ENST00000528227 SELENOTP62341 195 aa18.25■□□□□ 0.51
TRIM3-206ENST00000528227 SPANXN2Q5MJ10 180 aa18.25■□□□□ 0.51
TRIM3-206ENST00000528227 NACAE9PAV3 2078 aa18.25■□□□□ 0.51
TRIM3-206ENST00000528227 A0A087X0K7 114 aa18.24■□□□□ 0.51
TRIM3-206ENST00000528227 CXCL3P19876 107 aa18.24■□□□□ 0.51
TRIM3-206ENST00000528227 TSPOP30536 169 aa18.24■□□□□ 0.51
TRIM3-206ENST00000528227 RRAS2P62070 204 aaPredicted RBP18.24■□□□□ 0.51
TRIM3-206ENST00000528227 DLK1P80370 383 aa18.24■□□□□ 0.51
TRIM3-206ENST00000528227 TMEM14EPQ6UXP3 125 aa18.24■□□□□ 0.51
TRIM3-206ENST00000528227 C15orf53Q8NAA6 179 aa18.24■□□□□ 0.51
TRIM3-206ENST00000528227 PKD1P98161 4303 aa18.23■□□□□ 0.51
TRIM3-206ENST00000528227 TRAV12-2A0A075B6T6 113 aa18.23■□□□□ 0.51
TRIM3-206ENST00000528227 OR4E1P0C645 316 aa18.23■□□□□ 0.51
TRIM3-206ENST00000528227 BAK1Q16611 211 aa18.23■□□□□ 0.51
TRIM3-206ENST00000528227 RBM38Q9H0Z9 239 aaKnown RBP18.23■□□□□ 0.51
TRIM3-206ENST00000528227 NPVFQ9HCQ7 196 aa18.23■□□□□ 0.51
TRIM3-206ENST00000528227 PLAC8L1A1L4L8 177 aa18.22■□□□□ 0.51
TRIM3-206ENST00000528227 FNDC10F2Z333 226 aa18.22■□□□□ 0.51
TRIM3-206ENST00000528227 K7EPK0 472 aa18.22■□□□□ 0.51
TRIM3-206ENST00000528227 METTL15P1P0C7V9 234 aa18.22■□□□□ 0.51
TRIM3-206ENST00000528227 INPP1P49441 399 aa18.22■□□□□ 0.51
TRIM3-206ENST00000528227 HIST1H1AQ02539 215 aaPredicted RBP18.22■□□□□ 0.51
TRIM3-206ENST00000528227 OR8A1Q8NGG7 326 aa18.22■□□□□ 0.51
TRIM3-206ENST00000528227 DEFB130BP0DP73 79 aa18.21■□□□□ 0.51
TRIM3-206ENST00000528227 DEFB130AP0DP74 79 aa18.21■□□□□ 0.51
TRIM3-206ENST00000528227 AZU1P20160 251 aa18.21■□□□□ 0.51
TRIM3-206ENST00000528227 PSG3Q16557 428 aa18.21■□□□□ 0.51
TRIM3-206ENST00000528227 TRIQKQ629K1 86 aa18.21■□□□□ 0.51
TRIM3-206ENST00000528227 PATE2Q6UY27 113 aa18.21■□□□□ 0.51
TRIM3-206ENST00000528227 S100A7AQ86SG5 101 aa18.21■□□□□ 0.51
TRIM3-206ENST00000528227 ARL6Q9H0F7 186 aa18.21■□□□□ 0.51
TRIM3-206ENST00000528227 MRPS12O15235 138 aaKnown RBP18.2■□□□□ 0.5
TRIM3-206ENST00000528227 FAM3BP58499 235 aaPredicted RBP18.2■□□□□ 0.5
TRIM3-206ENST00000528227 RHOBP62745 196 aa18.2■□□□□ 0.5
TRIM3-206ENST00000528227 SOHLH1Q5JUK2 328 aa18.2■□□□□ 0.5
TRIM3-206ENST00000528227 OR10P1Q8NGE3 313 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms