RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 LCE6AA0A183 80 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 UBE2L5PA0A1B0GUS4 154 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 HYPMO75409 117 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 PVALBP20472 110 aaPredicted RBP13.18□□□□□ -0.3
TRIM3-205ENST00000527237 FXYD7P58549 80 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 DEFA1P59665 94 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 DEFA3P59666 94 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 LRRC37A5PQ49AS3 106 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 CSNK1G2-AS1Q8NCQ2 148 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 GGACTQ9BVM4 153 aa13.18□□□□□ -0.3
TRIM3-205ENST00000527237 SAV1Q9H4B6 383 aaPredicted RBP13.18□□□□□ -0.3
TRIM3-205ENST00000527237 CXorf65A6NEN9 183 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 ISLRO14498 428 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 ID1P41134 155 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 SULT1A1P50225 295 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 H2BFSP57053 126 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 MORN5Q5VZ52 161 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 Q8NAQ8 132 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 ARV1Q9H2C2 271 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 C11orf68Q9H3H3 251 aaKnown RBP13.17□□□□□ -0.3
TRIM3-205ENST00000527237 OR5AC2Q9NZP5 309 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 X6R8D5 127 aa13.17□□□□□ -0.3
TRIM3-205ENST00000527237 TRAV8-2A0A0B4J237 113 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 H0YIZ8 118 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
TRIM3-205ENST00000527237 FGL1Q08830 312 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 MIC13Q5XKP0 118 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 FOXI2Q6ZQN5 318 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 UQCC1Q9NVA1 299 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 XCL2Q9UBD3 114 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 WDR83OSQ9Y284 106 aa13.16□□□□□ -0.3
TRIM3-205ENST00000527237 IGHV4-28A0A0C4DH34 117 aa13.15□□□□□ -0.3
TRIM3-205ENST00000527237 MRPS12O15235 138 aaKnown RBP13.15□□□□□ -0.3
TRIM3-205ENST00000527237 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
TRIM3-205ENST00000527237 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
TRIM3-205ENST00000527237 CAMLGP49069 296 aa13.15□□□□□ -0.3
TRIM3-205ENST00000527237 MEOX2P50222 304 aa13.15□□□□□ -0.3
TRIM3-205ENST00000527237 ZNF709Q8N972 641 aa13.15□□□□□ -0.3
TRIM3-205ENST00000527237 GPR82Q96P67 336 aa13.15□□□□□ -0.3
TRIM3-205ENST00000527237 NMES1Q9C002 83 aa13.15□□□□□ -0.3
TRIM3-205ENST00000527237 HYDINQ4G0P3 5121 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 A0A0J9YX75 114 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 ZNF705EA8MWA4 302 aaPredicted RBP13.14□□□□□ -0.31
TRIM3-205ENST00000527237 SNRPCP09234 159 aaKnown RBP13.14□□□□□ -0.31
TRIM3-205ENST00000527237 RBMY1A1P0DJD3 496 aaKnown RBP13.14□□□□□ -0.31
TRIM3-205ENST00000527237 RBMY1CP0DJD4 496 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 NANOS2P60321 138 aaKnown RBP13.14□□□□□ -0.31
TRIM3-205ENST00000527237 NHLH2Q02577 135 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 BAXQ07812 192 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 RBMY1FQ15415 496 aaKnown RBP13.14□□□□□ -0.31
TRIM3-205ENST00000527237 TMEM41BQ5BJD5 291 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 STX12Q86Y82 276 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 OR4B1Q8NGF8 309 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 TMEM37Q8WXS4 190 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 SLC35B3Q9H1N7 401 aa13.14□□□□□ -0.31
TRIM3-205ENST00000527237 COX7A2P2O60397 106 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 RPL7P18124 248 aaKnown RBP13.13□□□□□ -0.31
TRIM3-205ENST00000527237 PRR20EP86478 221 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 PRR20CP86479 221 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 PRR20DP86480 221 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 PRR20BP86481 221 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 PRR20AP86496 221 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 OPCMLQ14982 345 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 LINC00305Q7Z4B0 112 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 RPRMQ9NS64 109 aa13.13□□□□□ -0.31
TRIM3-205ENST00000527237 DNAH1Q9P2D7 4330 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 A0A087X0K7 114 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 SSNA1O43805 119 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 ZNF705DP0CH99 300 aaPredicted RBP13.12□□□□□ -0.31
TRIM3-205ENST00000527237 ZNF705BP0CI00 300 aaPredicted RBP13.12□□□□□ -0.31
TRIM3-205ENST00000527237 FGF7P21781 194 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 S100A7P31151 101 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 S100A11P31949 105 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 HBG1P69891 147 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 HBG2P69892 147 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 PPP1R1CQ8WVI7 109 aa13.12□□□□□ -0.31
TRIM3-205ENST00000527237 ELOA3CA0A087WX78 387 aaPredicted RBP13.11□□□□□ -0.31
TRIM3-205ENST00000527237 H3BTX0 84 aa13.11□□□□□ -0.31
TRIM3-205ENST00000527237 PXDC1Q5TGL8 231 aa13.11□□□□□ -0.31
TRIM3-205ENST00000527237 SAMD13Q5VXD3 122 aa13.11□□□□□ -0.31
TRIM3-205ENST00000527237 EBLN2Q6P2I7 272 aa13.11□□□□□ -0.31
TRIM3-205ENST00000527237 ALG5Q9Y673 324 aa13.11□□□□□ -0.31
TRIM3-205ENST00000527237 NUPR2A6NF83 97 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 E5RGE8 158 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 NUTF2P61970 127 aaKnown RBP13.1□□□□□ -0.31
TRIM3-205ENST00000527237 C10orf113Q5VZT2 155 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 OR5C1Q8NGR4 320 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 C11orf45Q8TAV5 145 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 THAP6Q8TBB0 222 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 PHLDA1Q8WV24 401 aaPredicted RBP13.1□□□□□ -0.31
TRIM3-205ENST00000527237 C1QTNF4Q9BXJ3 329 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 CELA1Q9UNI1 258 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 PXMP4Q9Y6I8 212 aa13.1□□□□□ -0.31
TRIM3-205ENST00000527237 TRAV5A0A0B4J249 113 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms