RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 LRTM2Q8N967 370 aa11.29□□□□□ -0.6
CHEK1-209ENST00000527013 CIB3Q96Q77 187 aaPredicted RBP11.29□□□□□ -0.6
CHEK1-209ENST00000527013 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
CHEK1-209ENST00000527013 MED6O75586 246 aa11.28□□□□□ -0.6
CHEK1-209ENST00000527013 PRM2P04554 102 aa11.28□□□□□ -0.6
CHEK1-209ENST00000527013 IAPPP10997 89 aa11.28□□□□□ -0.6
CHEK1-209ENST00000527013 S100A7P31151 101 aa11.28□□□□□ -0.6
CHEK1-209ENST00000527013 TMEM128Q5BJH2 165 aa11.28□□□□□ -0.6
CHEK1-209ENST00000527013 BPIFCQ8NFQ6 507 aa11.28□□□□□ -0.6
CHEK1-209ENST00000527013 RSL24D1Q9UHA3 163 aaKnown RBP11.28□□□□□ -0.6
CHEK1-209ENST00000527013 ATP5G1P05496 136 aa11.27□□□□□ -0.61
CHEK1-209ENST00000527013 DEFB130BP0DP73 79 aa11.27□□□□□ -0.61
CHEK1-209ENST00000527013 DEFB130AP0DP74 79 aa11.27□□□□□ -0.61
CHEK1-209ENST00000527013 ATP5G3P48201 142 aa11.27□□□□□ -0.61
CHEK1-209ENST00000527013 RPP30P78346 268 aaKnown RBP11.27□□□□□ -0.61
CHEK1-209ENST00000527013 TMEM182Q6ZP80 229 aaPredicted RBP11.27□□□□□ -0.61
CHEK1-209ENST00000527013 SOSTQ9BQB4 213 aa11.27□□□□□ -0.61
CHEK1-209ENST00000527013 MCUBQ9NWR8 336 aa11.27□□□□□ -0.61
CHEK1-209ENST00000527013 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
CHEK1-209ENST00000527013 CBY3A6NI87 242 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 F5H768 121 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 ORM2P19652 201 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 AZU1P20160 251 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 CCL18P55774 89 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 LCE2DQ5TA82 110 aaPredicted RBP11.26□□□□□ -0.61
CHEK1-209ENST00000527013 BAP18Q8IXM2 172 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 TMEM256Q8N2U0 113 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 DYNC2LI1Q8TCX1 351 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 TMEM147Q9BVK8 224 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 LRP1BQ9NZR2 4599 aa11.26□□□□□ -0.61
CHEK1-209ENST00000527013 BOLA2-SMG1P6H3BVE0 249 aa11.25□□□□□ -0.61
CHEK1-209ENST00000527013 SYNGR2O43760 224 aa11.25□□□□□ -0.61
CHEK1-209ENST00000527013 GATA2P23769 480 aaPredicted RBP11.25□□□□□ -0.61
CHEK1-209ENST00000527013 IGFL4Q6B9Z1 124 aa11.25□□□□□ -0.61
CHEK1-209ENST00000527013 RNF182Q8N6D2 247 aa11.25□□□□□ -0.61
CHEK1-209ENST00000527013 MAPKAPK5-AS1Q8N8E1 139 aa11.25□□□□□ -0.61
CHEK1-209ENST00000527013 PAIP2BQ9ULR5 123 aaKnown RBP11.25□□□□□ -0.61
CHEK1-209ENST00000527013 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
CHEK1-209ENST00000527013 H3BRN7 92 aa11.24□□□□□ -0.61
CHEK1-209ENST00000527013 NUDT3O95989 172 aa11.24□□□□□ -0.61
CHEK1-209ENST00000527013 TAS2R60P59551 318 aa11.24□□□□□ -0.61
CHEK1-209ENST00000527013 FCN2Q15485 313 aa11.24□□□□□ -0.61
CHEK1-209ENST00000527013 TMEM144Q7Z5S9 345 aa11.24□□□□□ -0.61
CHEK1-209ENST00000527013 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
CHEK1-209ENST00000527013 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
CHEK1-209ENST00000527013 TRAV12-2A0A075B6T6 113 aa11.23□□□□□ -0.61
CHEK1-209ENST00000527013 WRBO00258 174 aa11.23□□□□□ -0.61
CHEK1-209ENST00000527013 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
CHEK1-209ENST00000527013 CXCL3P19876 107 aa11.23□□□□□ -0.61
CHEK1-209ENST00000527013 FAUP35544 74 aaKnown RBP11.23□□□□□ -0.61
CHEK1-209ENST00000527013 PLP1P60201 277 aa11.23□□□□□ -0.61
CHEK1-209ENST00000527013 ZNF738Q8NE65 137 aa11.23□□□□□ -0.61
CHEK1-209ENST00000527013 RAB2BQ8WUD1 216 aa11.23□□□□□ -0.61
CHEK1-209ENST00000527013 RNF141Q8WVD5 230 aa11.23□□□□□ -0.61
CHEK1-209ENST00000527013 C16orf74Q96GX8 76 aa11.23□□□□□ -0.61
CHEK1-209ENST00000527013 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
CHEK1-209ENST00000527013 TIMM8BQ9Y5J9 83 aaPredicted RBP11.23□□□□□ -0.61
CHEK1-209ENST00000527013 A0A087X0K7 114 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 TNFSF8P32971 234 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 AKR1C1Q04828 323 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 SPANXN5Q5MJ07 72 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 ZNF493Q6ZR52 646 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 ACOT7LQ6ZUV0 252 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 TMED4Q7Z7H5 227 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 Q8N1X5 172 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 LINC01587Q99440 93 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 BCL7BQ9BQE9 202 aa11.22□□□□□ -0.61
CHEK1-209ENST00000527013 SLIRPQ9GZT3 109 aaKnown RBP11.22□□□□□ -0.61
CHEK1-209ENST00000527013 VAMP1P23763 118 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 TMBIM6P55061 237 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 RAP2BP61225 183 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 FGL1Q08830 312 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 CYP2G1PQ6ZSU1 146 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 SSX7Q7RTT5 188 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 RNASE8Q8TDE3 154 aaKnown RBP11.21□□□□□ -0.61
CHEK1-209ENST00000527013 TRIM63Q969Q1 353 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 ZNF503Q96F45 646 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 SLC25A21Q9BQT8 299 aaPredicted RBP11.21□□□□□ -0.61
CHEK1-209ENST00000527013 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.61
CHEK1-209ENST00000527013 STRAPQ9Y3F4 350 aaKnown RBP11.21□□□□□ -0.61
CHEK1-209ENST00000527013 HYPMO75409 117 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 SFT2D2O95562 160 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 IL5P05113 134 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 AP3S2P59780 193 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 SELENOTP62341 195 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 ID3Q02535 119 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
CHEK1-209ENST00000527013 PSG3Q16557 428 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 LINC00612Q8N6U2 182 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 TMEM263Q8WUH6 116 aaKnown RBP11.2□□□□□ -0.62
CHEK1-209ENST00000527013 DEDD2Q8WXF8 326 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 Q9H8V8 135 aa11.2□□□□□ -0.62
CHEK1-209ENST00000527013 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
CHEK1-209ENST00000527013 PMS2P5A8MQ11 134 aa11.19□□□□□ -0.62
CHEK1-209ENST00000527013 CDKN1BP46527 198 aa11.19□□□□□ -0.62
CHEK1-209ENST00000527013 RHOBP62745 196 aa11.19□□□□□ -0.62
CHEK1-209ENST00000527013 PPP1R1AQ13522 171 aa11.19□□□□□ -0.62
CHEK1-209ENST00000527013 CLINT1Q14677 625 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms